[←][→] ath   At1g55930 Gene
functional annotation
Function   CBS domain-containing protein / transporter associated domain-containing protein      
GO BP
GO:0015693 [list] [network] magnesium ion transport  (10 genes)  IDA  
GO CC
GO:0009706 [list] [network] chloroplast inner membrane  (61 genes)  IDA  
GO:0009941 [list] [network] chloroplast envelope  (582 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO:0009536 [list] [network] plastid  (5425 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  HDA  
GO MF
GO:0050660 [list] [network] flavin adenine dinucleotide binding  (83 genes)  IEA  
KEGG
Protein NP_001321525.1  NP_175989.2 
BLAST NP_001321525.1  NP_175989.2 
Orthologous [Ortholog page] AT3G13070 (ath)  LOC4333362 (osa)  LOC7485088 (ppo)  LOC11436662 (mtr)  LOC100778907 (gma)  LOC101250908 (sly)  LOC103859495 (bra)  LOC103870197 (bra)  LOC123105576 (tae)  LOC123113886 (tae)  LOC123123395 (tae)  LOC123452921 (hvu) 
Subcellular
localization
wolf
plas 4,  E.R. 3,  vacu 1,  cyto 1,  mito 1  (predict for NP_001321525.1)
plas 6,  E.R. 2,  cyto 1,  mito 1,  extr 1  (predict for NP_175989.2)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001321525.1)
chlo 9  (predict for NP_175989.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 2
Genes directly connected with AT1G55930 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
6.9 SDN2 small RNA degrading nuclease 2 [detail] 830437
6.7 AT1G16650 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [detail] 838234
6.5 AT4G15820 ABC subfamily C protein [detail] 827263
5.6 ARC3 GTP binding protein [detail] 843839
5.5 AT3G13070 CBS domain-containing protein / transporter associated domain-containing protein [detail] 820495
5.2 AT1G64180 intracellular protein transport protein USO1-like protein [detail] 842722
Coexpressed
gene list		 [Coexpressed gene list for AT1G55930]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260598_at
260598_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260598_at
260598_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260598_at
260598_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 842044      
Refseq ID (protein) NP_001321525.1 
NP_175989.2 


The preparation time of this page was 0.1 [sec].