[←][→] ath   AT1G56310 Gene
functional annotation
Function   Polynucleotidyl transferase, ribonuclease H-like superfamily protein  
GO BP
GO:0010587 [list] [network] miRNA catabolic process  (6 genes)  IGI  
GO:0030422 [list] [network] production of siRNA involved in RNA interference  (34 genes)  IMP  
GO:0090305 [list] [network] nucleic acid phosphodiester bond hydrolysis  (71 genes)  ISS  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0008408 [list] [network] 3'-5' exonuclease activity  (65 genes)  IBA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001319254.1  NP_176027.2 
BLAST NP_001319254.1  NP_176027.2 
Orthologous [Ortholog page] LOC4338523 (osa)  LOC100254615 (vvi)  LOC100382828 (zma)  LOC100788595 (gma)  LOC100797818 (gma)  LOC101268229 (sly)  LOC103838695 (bra)  LOC112421350 (mtr) 
Subcellular
localization
wolf
nucl 5,  cyto_nucl 5,  cyto 4  (predict for NP_001319254.1)
nucl 5,  cyto_nucl 5,  cyto 4  (predict for NP_176027.2)
Subcellular
localization
TargetP
other 9  (predict for NP_001319254.1)
other 9  (predict for NP_176027.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT1G56310 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.0 UCH1 Peptidase C12, ubiquitin carboxyl-terminal hydrolase 1 [detail] 831492
5.9 AT2G18850 SET domain-containing protein [detail] 816400
5.8 TRFL7 TRF-like 7 [detail] 837201
5.7 AT4G11970 YTH family protein [detail] 826804
5.5 ORC5 origin recognition complex protein 5 [detail] 829114
5.1 TTN9 titan9 [detail] 821546
3.6 AT1G03340 hypothetical protein [detail] 839525
Coexpressed
gene list		 [Coexpressed gene list for AT1G56310]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
257587_at
257587_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
257587_at
257587_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
257587_at
257587_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 842084      
Refseq ID (protein) NP_001319254.1 
NP_176027.2 


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