[←][→] ath   At1g56340 Gene
functional annotation
Function   calreticulin 1a    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0055074 [list] [network] calcium ion homeostasis  (33 genes)  IGI  
GO:0034976 [list] [network] response to endoplasmic reticulum stress  (68 genes)  IPI  
GO CC
GO:0099503 [list] [network] secretory vesicle  (171 genes)  HDA  
GO:0000325 [list] [network] plant-type vacuole  (785 genes)  HDA  
GO:0005783 [list] [network] endoplasmic reticulum  (856 genes)  HDA  
GO:0009506 [list] [network] plasmodesma  (871 genes)  HDA  
GO:0005794 [list] [network] Golgi apparatus  (1182 genes)  RCA  
GO:0005829 [list] [network] cytosol  (2559 genes)  RCA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10305 genes)  HDA  
GO MF
KEGG ath04141 [list] [network] Protein processing in endoplasmic reticulum (215 genes)
ath04145 [list] [network] Phagosome (83 genes)
Protein NP_001031199.1  NP_176030.1 
BLAST NP_001031199.1  NP_176030.1 
Orthologous [Ortholog page] LOC606330 (tae)  CRT1b (ath)  LOC4334675 (osa)  CRO1 (osa)  LOC7478905 (ppo)  LOC11416675 (mtr)  LOC18098599 (ppo)  LOC100037475 (gma)  LOC100811997 (gma)  LOC101246093 (sly)  LOC103836348 (bra)  LOC103838690 (bra)  LOC103847648 (bra)  LOC103871649 (bra)  LOC112327650 (ppo)  LOC123087811 (tae)  LOC123114118 (tae)  LOC123123605 (tae)  LOC123399340 (hvu)  LOC123428423 (hvu) 
Subcellular
localization
wolf
vacu 4,  extr 2,  E.R. 1,  golg 1,  chlo 1,  cyto 1,  golg_plas 1,  E.R._plas 1  (predict for NP_001031199.1)
E.R. 5,  extr 2,  golg 1,  chlo 1,  vacu 1,  golg_plas 1  (predict for NP_176030.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_001031199.1)
scret 9  (predict for NP_176030.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 16
ath04145 Phagosome 6
ath03060 Protein export 5
Genes directly connected with CRT1a on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
21.8 SHD Chaperone protein htpG family protein [detail] 828520
20.7 CRT1b calreticulin 1b [detail] 837441
20.5 CNX1 calnexin 1 [detail] 836301
18.5 UNE5 thioredoxin family protein [detail] 819360
10.5 AT1G42480 TLR4 regulator/MIR-interacting MSAP protein [detail] 840852
Coexpressed
gene list		 [Coexpressed gene list for CRT1a]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256216_at
256216_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256216_at
256216_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
256216_at
256216_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 842087      
Refseq ID (protein) NP_001031199.1 
NP_176030.1 


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