[][] ath   AT1G56680 Gene
functional annotation
Function   Chitinase family protein
GO BP
GO:0006032 [list] [network] chitin catabolic process  (23 genes)  IEA  
GO:0016998 [list] [network] cell wall macromolecule catabolic process  (30 genes)  IEA  
GO:0005975 [list] [network] carbohydrate metabolic process  (995 genes)  IEA  
GO CC
GO:0005576 [list] [network] extracellular region  (3363 genes)  ISM  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO MF
GO:0004568 [list] [network] chitinase activity  (23 genes)  IEA  
GO:0008061 [list] [network] chitin binding  (23 genes)  IEA  
KEGG ath00520 [list] [network] Amino sugar and nucleotide sugar metabolism (131 genes)
Protein NP_001320281.1  NP_176061.1 
BLAST NP_001320281.1  NP_176061.1 
Orthologous
Subcellular
localization
wolf
chlo 3,  nucl 3,  plas 2,  extr 1,  cyto_nucl 1,  cysk_nucl 1,  mito_plas 1  (predict for NP_001320281.1)
extr 4,  chlo 2,  vacu 2,  nucl 1,  mito 1,  golg 1  (predict for NP_176061.1)
Subcellular
localization
TargetP
other 9,  mito 3  (predict for NP_001320281.1)
scret 9  (predict for NP_176061.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT1G56680 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
9.9 AT5G62340 Plant invertase/pectin methylesterase inhibitor superfamily protein [detail] 836355
8.5 sks16 SKU5 similar 16 [detail] 816895
7.8 RGF3 root meristem growth factor [detail] 814929
6.0 AT5G14150 Emb:.1 protein, putative (Protein of unknown function, DUF642) [detail] 831265
4.0 AT4G33145 hypothetical protein [detail] 6240963
3.7 ENODL16 early nodulin-like protein 16 [detail] 821257
Coexpressed
gene list
[Coexpressed gene list for AT1G56680]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245674_at
245674_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245674_at
245674_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
245674_at
245674_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 842124    
Refseq ID (protein) NP_001320281.1 
NP_176061.1 


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