[←][→] ath   At1g57540 Gene
functional annotation
Function   40S ribosomal protein      
GO BP
GO:1901565 [list] [network] organonitrogen compound catabolic process  (591 genes)  IEA  
GO:0044248 [list] [network] cellular catabolic process  (1086 genes)  IEA  
GO:0019752 [list] [network] carboxylic acid metabolic process  (1307 genes)  IEA  
GO:0010035 [list] [network] response to inorganic substance  (2100 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (4228 genes)  ISM  
GO MF
KEGG
Protein NP_001077732.1  NP_564723.1  NP_974042.1 
BLAST NP_001077732.1  NP_564723.1  NP_974042.1 
Orthologous [Ortholog page] LOC18098455 (ppo)  LOC25485792 (mtr)  LOC100305789 (gma)  LOC100793929 (gma)  LOC101251266 (sly)  LOC103838667 (bra)  LOC123060886 (tae)  LOC123069521 (tae)  LOC123078019 (tae)  LOC123117770 (tae)  LOC123145893 (tae)  LOC123177105 (tae)  LOC123398035 (hvu)  LOC123443362 (hvu) 
Subcellular
localization
wolf
mito 4,  chlo 4,  nucl_plas 1,  nucl 1,  plas 1  (predict for NP_001077732.1)
mito 4,  chlo 4,  nucl_plas 1,  nucl 1,  plas 1  (predict for NP_564723.1)
mito 4,  chlo 4,  nucl_plas 1,  nucl 1,  plas 1  (predict for NP_974042.1)
Subcellular
localization
TargetP
mito 5,  other 4  (predict for NP_001077732.1)
mito 5,  other 4  (predict for NP_564723.1)
mito 5,  other 4  (predict for NP_974042.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 5
ath03040 Spliceosome 2
ath03250 Viral life cycle - HIV-1 2
Genes directly connected with AT1G57540 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.2 AT1G02160 Cox19 family protein (CHCH motif) [detail] 839554
7.1 AT4G38490 uncharacterized protein [detail] 830005
6.7 AT5G09770 Ribosomal protein L17 family protein [detail] 830837
5.9 ASPGA1 N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein [detail] 830704
Coexpressed
gene list		 [Coexpressed gene list for AT1G57540]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246400_at
246400_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246400_at
246400_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246400_at
246400_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 842129      
Refseq ID (protein) NP_001077732.1 
NP_564723.1 
NP_974042.1 


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