[←][→] ath   AT1G57540 Gene
functional annotation
Function   40S ribosomal protein  
GO BP
GO CC
GO:0005840 [list] [network] ribosome  (463 genes)  IEA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  ISM  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO MF
KEGG
Protein NP_001077732.1  NP_564723.1  NP_974042.1 
BLAST NP_001077732.1  NP_564723.1  NP_974042.1 
Orthologous [Ortholog page] LOC25485792 (mtr)  LOC100249447 (vvi)  LOC100277564 (zma)  LOC100305789 (gma)  LOC100793929 (gma)  LOC101251266 (sly)  LOC103838667 (bra) 
Subcellular
localization
wolf
mito 4,  chlo 4,  nucl_plas 1,  nucl 1,  plas 1  (predict for NP_001077732.1)
mito 4,  chlo 4,  nucl_plas 1,  nucl 1,  plas 1  (predict for NP_564723.1)
mito 4,  chlo 4,  nucl_plas 1,  nucl 1,  plas 1  (predict for NP_974042.1)
Subcellular
localization
TargetP
mito 5,  other 4  (predict for NP_001077732.1)
mito 5,  other 4  (predict for NP_564723.1)
mito 5,  other 4  (predict for NP_974042.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 6
ath03040 Spliceosome 2
Genes directly connected with AT1G57540 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.1 AT1G02160 Cox19 family protein (CHCH motif) [detail] 839554
6.7 AT5G09770 Ribosomal protein L17 family protein [detail] 830837
6.6 AT1G30880 hypothetical protein [detail] 839972
Coexpressed
gene list		 [Coexpressed gene list for AT1G57540]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
246400_at
246400_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
246400_at
246400_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
246400_at
246400_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 842129      
Refseq ID (protein) NP_001077732.1 
NP_564723.1 
NP_974042.1 


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