[←][→] ath   AT1G57870 Gene
functional annotation
Function   shaggy-like kinase 42  
GO BP
GO:0006972 [list] [network] hyperosmotic response  (68 genes)  IEP  
GO:0009651 [list] [network] response to salt stress  (485 genes)  IEP  
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0005524 [list] [network] ATP binding  (2003 genes)  IEA  
KEGG
Protein NP_001185256.1  NP_001319262.1  NP_001320412.1  NP_176096.1 
BLAST NP_001185256.1  NP_001319262.1  NP_001320412.1  NP_176096.1 
Orthologous [Ortholog page] LOC542518 (zma)  SK41 (ath)  LOC4334738 (osa)  LOC11430329 (mtr)  LOC100252299 (vvi)  LOC100799387 (gma)  LOC100820098 (gma)  LOC101265073 (sly)  LOC103836306 (bra)  LOC103871763 (bra) 
Subcellular
localization
wolf
nucl 4,  cyto 3,  mito 2,  cyto_mito 1,  cysk_nucl 1,  cyto_plas 1  (predict for NP_001185256.1)
nucl 4,  mito 2,  cyto 2,  cysk_nucl 2,  nucl_plas 2  (predict for NP_001319262.1)
nucl 4,  mito 2,  cyto 2,  cysk_nucl 2,  nucl_plas 2  (predict for NP_001320412.1)
nucl 4,  mito 2,  cyto 2,  cysk_nucl 2,  nucl_plas 2  (predict for NP_176096.1)
Subcellular
localization
TargetP
other 4,  chlo 4  (predict for NP_001185256.1)
other 4,  chlo 4  (predict for NP_001319262.1)
other 4,  chlo 4  (predict for NP_001320412.1)
other 4,  chlo 4  (predict for NP_176096.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
ath04144 Endocytosis 2
Genes directly connected with SK42 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.9 MHK Protein kinase superfamily protein [detail] 826915
5.8 SK41 shaggy-like protein kinase 41 [detail] 837516
5.5 AT4G39870 TLD-domain containing nucleolar protein [detail] 830146
Coexpressed
gene list		 [Coexpressed gene list for SK42]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245825_at
245825_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245825_at
245825_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
245825_at
245825_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 842162      
Refseq ID (protein) NP_001185256.1 
NP_001319262.1 
NP_001320412.1 
NP_176096.1 


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