[←][→] ath   AT1G59560 Gene
functional annotation
Function   E3 Ubiquitin ligase family protein  
GO BP
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IEA  
GO:0006996 [list] [network] organelle organization  (1508 genes)  IEA  
GO CC
GO:0009707 [list] [network] chloroplast outer membrane  (55 genes)  IEA  
GO:0009941 [list] [network] chloroplast envelope  (666 genes)  IDA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  ISM  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (434 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG
Protein NP_001320816.1  NP_001320817.1  NP_001320818.1  NP_564745.1 
BLAST NP_001320816.1  NP_001320817.1  NP_001320818.1  NP_564745.1 
Orthologous
Subcellular
localization
wolf
chlo 5,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_001320816.1)
chlo 4,  cyto 2,  nucl 1,  plas 1,  extr 1,  vacu 1,  E.R. 1,  golg 1,  nucl_plas 1,  golg_plas 1,  E.R._vacu 1,  E.R._plas 1  (predict for NP_001320817.1)
chlo 2,  cyto 2,  vacu 1,  golg 1,  cyto_nucl 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_001320818.1)
chlo 6,  vacu 1,  plas 1,  golg_plas 1,  E.R._vacu 1  (predict for NP_564745.1)
Subcellular
localization
TargetP
mito 5  (predict for NP_001320816.1)
mito 5  (predict for NP_001320817.1)
mito 5  (predict for NP_001320818.1)
mito 5  (predict for NP_564745.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 2
Genes directly connected with ZCF61 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
4.4 DMS3 defective in meristem silencing 3 [detail] 824086
4.2 AT1G06960 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 837206
4.1 CSN5B COP9-signalosome 5B [detail] 843463
Coexpressed
gene list		 [Coexpressed gene list for ZCF61]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262075_at
262075_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262075_at
262075_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262075_at
262075_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 842247      
Refseq ID (protein) NP_001320816.1 
NP_001320817.1 
NP_001320818.1 
NP_564745.1 


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