[][] ath   AT1G60190 Gene
functional annotation
Function   ARM repeat superfamily protein
GO BP
GO:0010029 [list] [network] regulation of seed germination  (84 genes)  IGI  
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (434 genes)  IEA  
KEGG
Protein NP_176225.1 
BLAST NP_176225.1 
Orthologous [Ortholog page] PUB18 (ath)LOC4345574 (osa)LOC4346922 (osa)LOC7457723 (ppo)LOC11406349 (mtr)LOC11446555 (mtr)LOC25489542 (mtr)LOC100241707 (vvi)LOC100243339 (vvi)LOC100281562 (zma)LOC100787869 (gma)LOC100795816 (gma)LOC100810963 (gma)LOC101249360 (sly)LOC101249811 (sly)LOC103653432 (zma)LOC103829733 (bra)LOC103871832 (bra)
Subcellular
localization
wolf
chlo 6,  chlo_mito 4,  nucl 2  (predict for NP_176225.1)
Subcellular
localization
TargetP
chlo 3  (predict for NP_176225.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 6
ath04075 Plant hormone signal transduction 5
Genes directly connected with PUB19 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
8.4 DIP2 E3 ubiquitin-protein ligase [detail] 831903
8.2 NCED3 nine-cis-epoxycarotenoid dioxygenase 3 [detail] 820667
7.3 AFP1 ABI five binding protein [detail] 843257
7.0 EDL3 EID1-like 3 [detail] 825481
6.2 AT5G15190 hypothetical protein [detail] 831371
5.5 GolS2 galactinol synthase 2 [detail] 842114
5.1 AT2G28400 senescence regulator (Protein of unknown function, DUF584) [detail] 817388
5.0 PUB18 plant U-box 18 [detail] 837597
4.6 AT3G48240 Octicosapeptide/Phox/Bem1p family protein [detail] 823982
Coexpressed
gene list
[Coexpressed gene list for PUB19]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
264217_at
264217_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
264217_at
264217_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
264217_at
264217_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 842314    
Refseq ID (protein) NP_176225.1 


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