ATTED-II : GeneID search result

[←][→] ath AT1G62010 Gene

functional annotation

Function

Mitochondrial transcription termination factor family protein

GO BP

GO:0006355 [list] [network] regulation of transcription, DNA-templated	(1984 genes)	IEA
GO:0032502 [list] [network] developmental process	(3194 genes)	IBA

GO CC

GO:0009507 [list] [network] chloroplast

(5095 genes)

IBA

GO MF

GO:0003690 [list] [network] double-stranded DNA binding

(343 genes)

IEA

KEGG

Protein

NP_176392.1

BLAST

NP_176392.1

Orthologous

[Ortholog page] AT1G56380 (ath) AT1G61960 (ath) AT1G61970 (ath) AT1G61980 (ath) AT1G61990 (ath) AT1G62110 (ath) AT1G62120 (ath) AT1G62150 (ath) AT1G62490 (ath) AT1G62085 (ath) LOC103831672 (bra) LOC103831681 (bra) LOC103831692 (bra) LOC103838031 (bra) LOC103838032 (bra) LOC103838392 (bra) LOC103838422 (bra) LOC103838423 (bra) LOC103838424 (bra) LOC103838425 (bra) LOC103838533 (bra) LOC103838705 (bra) LOC103860300 (bra) LOC108872245 (bra)

Subcellular
localization
wolf

chlo 4, mito 1, extr 1, cyto_nucl 1, nucl 1, cyto 1, mito_plas 1

(predict for NP_176392.1)

Subcellular
localization
TargetP

mito 8

(predict for NP_176392.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT1G62010 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
7.0	AT1G61990	Mitochondrial transcription termination factor family protein	[detail]	842494
6.4	AT2G01740	Tetratricopeptide repeat (TPR)-like superfamily protein	[detail]	814704
5.6	AT1G62150	Mitochondrial transcription termination factor family protein	[detail]	842511
4.1	AT4G10400	F-box/RNI-like/FBD-like domains-containing protein	[detail]	826632
2.2	AT2G36540	Haloacid dehalogenase-like hydrolase (HAD) superfamily protein	[detail]	818227

Coexpressed
gene list

[Coexpressed gene list for AT1G62010]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

257423_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

257423_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

257423_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	842496
Refseq ID (protein)	NP_176392.1

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