ATTED-II : GeneID search result

[←][→] ath AT1G62085 Gene

functional annotation

Function

Mitochondrial transcription termination factor family protein

GO BP

GO:0006355 [list] [network] regulation of transcription, DNA-templated	(1984 genes)	IEA
GO:0032502 [list] [network] developmental process	(3194 genes)	IBA

GO CC

GO:0005739 [list] [network] mitochondrion	(4405 genes)	ISM
GO:0009507 [list] [network] chloroplast	(5095 genes)	IBA

GO MF

GO:0003690 [list] [network] double-stranded DNA binding

(343 genes)

IEA

KEGG

Protein

NP_001319292.1 NP_974069.1

BLAST

NP_001319292.1 NP_974069.1

Orthologous

[Ortholog page] AT1G56380 (ath) AT1G61960 (ath) AT1G61970 (ath) AT1G61980 (ath) AT1G61990 (ath) AT1G62010 (ath) AT1G62110 (ath) AT1G62120 (ath) AT1G62150 (ath) AT1G62490 (ath) LOC103831672 (bra) LOC103831681 (bra) LOC103831692 (bra) LOC103838031 (bra) LOC103838032 (bra) LOC103838392 (bra) LOC103838422 (bra) LOC103838423 (bra) LOC103838424 (bra) LOC103838425 (bra) LOC103838533 (bra) LOC103838705 (bra) LOC103860300 (bra) LOC108872245 (bra)

Subcellular
localization
wolf

chlo 7, mito 2	(predict for NP_001319292.1)
chlo 7, mito 2	(predict for NP_974069.1)

Subcellular
localization
TargetP

mito 7	(predict for NP_001319292.1)
mito 7	(predict for NP_974069.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with AT1G62085 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
8.4	AT1G62110	Mitochondrial transcription termination factor family protein	[detail]	842507
6.3	AT1G62120	Mitochondrial transcription termination factor family protein	[detail]	842508
5.3	AT1G61990	Mitochondrial transcription termination factor family protein	[detail]	842494
4.2	AT1G63230	Tetratricopeptide repeat (TPR)-like superfamily protein	[detail]	842628

Coexpressed
gene list

[Coexpressed gene list for AT1G62085]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

264730_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

264730_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

264730_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	2745844
Refseq ID (protein)	NP_001319292.1
Refseq ID (protein)	NP_974069.1

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