[←][→] ath   AT1G63490 Gene
functional annotation
Function   transcription factor jumonji (jmjC) domain-containing protein  
GO BP
GO:0034721 [list] [network] histone H3-K4 demethylation, trimethyl-H3-K4-specific  (1 genes)  IDA  
GO:0009414 [list] [network] response to water deprivation  (361 genes)  IMP  
GO:0006355 [list] [network] regulation of transcription, DNA-templated  (1984 genes)  ISS  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  IDA ISM  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1599 genes)  ISS  
GO:0003677 [list] [network] DNA binding  (2280 genes)  IPI  
KEGG
Protein NP_001319304.1  NP_001320899.1  NP_001320900.1  NP_001320901.1 
BLAST NP_001319304.1  NP_001320899.1  NP_001320900.1  NP_001320901.1 
Orthologous [Ortholog page] LOC9271593 (osa)  LOC11429104 (mtr)  LOC100261599 (vvi)  LOC100789512 (gma)  LOC100819576 (gma)  LOC101259658 (sly)  LOC103626493 (zma)  LOC103838273 (bra) 
Subcellular
localization
wolf
nucl 4,  cyto 2,  cysk_nucl 2,  nucl_plas 2  (predict for NP_001319304.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for NP_001320899.1)
cyto 6,  chlo 1,  nucl 1,  cysk 1,  cysk_nucl 1  (predict for NP_001320900.1)
nucl 4,  cyto 4,  cyto_nucl 4  (predict for NP_001320901.1)
Subcellular
localization
TargetP
other 5,  scret 4  (predict for NP_001319304.1)
other 6,  mito 4  (predict for NP_001320899.1)
other 7  (predict for NP_001320900.1)
other 6,  mito 4  (predict for NP_001320901.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03022 Basal transcription factors 2
Genes directly connected with AT1G63490 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.9 SDG2 SET domain protein 2 [detail] 827183
7.3 EMB2773 PHD finger family protein [detail] 831407
7.1 SDG25 SET domain protein 25 [detail] 834246
6.0 UVH6 RAD3-like DNA-binding helicase protein [detail] 839557
5.5 AT2G37520 Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain-containing protein [detail] 818328
Coexpressed
gene list		 [Coexpressed gene list for AT1G63490]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261531_at
261531_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261531_at
261531_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261531_at
261531_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 842655      
Refseq ID (protein) NP_001319304.1 
NP_001320899.1 
NP_001320900.1 
NP_001320901.1 


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