[←][→] ath   AT1G63540 Gene
functional annotation
Function   hydroxyproline-rich glycoprotein family protein  
GO BP
GO:0000973 [list] [network] posttranscriptional tethering of RNA polymerase II gene DNA at nuclear periphery  (5 genes)  IBA  
GO:0034398 [list] [network] telomere tethering at nuclear periphery  (5 genes)  IBA  
GO:0006405 [list] [network] RNA export from nucleus  (47 genes)  IBA  
GO:0006606 [list] [network] protein import into nucleus  (47 genes)  IBA  
GO CC
GO:0044614 [list] [network] nuclear pore cytoplasmic filaments  (5 genes)  IBA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0008139 [list] [network] nuclear localization sequence binding  (20 genes)  IBA  
GO:0017056 [list] [network] structural constituent of nuclear pore  (21 genes)  IBA  
GO:0003723 [list] [network] RNA binding  (1790 genes)  IBA  
KEGG
Protein NP_176542.1 
BLAST NP_176542.1 
Orthologous [Ortholog page] AT1G63530 (ath)  LOC102668982 (gma)  LOC103838268 (bra)  LOC103838269 (bra)  LOC109121495 (vvi) 
Subcellular
localization
wolf
nucl 9  (predict for NP_176542.1)
Subcellular
localization
TargetP
other 8  (predict for NP_176542.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT1G63540 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.6 AT5G15360 transmembrane protein [detail] 831388
4.9 AT4G19240 hypothetical protein [detail] 827664
4.3 FUT13 fucosyltransferase 13 [detail] 843530
3.7 AT5G24240 phosphatidylinositol 4-kinase gamma-like protein [detail] 832491
3.6 AT4G29200 Beta-galactosidase related protein [detail] 829041
2.5 AT2G15555 [detail] 6240289
Coexpressed
gene list		 [Coexpressed gene list for AT1G63540]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
261544_at
261544_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
261544_at
261544_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
261544_at
261544_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 842659      
Refseq ID (protein) NP_176542.1 


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