[←][→] ath   At1g63970 Gene
functional annotation
Function   isoprenoid F    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0019288 [list] [network] isopentenyl diphosphate biosynthetic process, methylerythritol 4-phosphate pathway  (8 genes)  IEA  
GO:0016117 [list] [network] carotenoid biosynthetic process  (21 genes)  IMP  
GO:0015995 [list] [network] chlorophyll biosynthetic process  (56 genes)  IMP  
GO CC
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA ISM  
GO MF
GO:0008685 [list] [network] 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase activity  (1 genes)  IGI  
KEGG ath00900 [list] [network] Terpenoid backbone biosynthesis (61 genes)
Protein NP_001319313.1  NP_850971.1 
BLAST NP_001319313.1  NP_850971.1 
Orthologous [Ortholog page] LOC4330320 (osa)  LOC7458198 (ppo)  LOC7472744 (ppo)  LOC11443066 (mtr)  LOC100306378 (gma)  ISPF (sly)  LOC103838115 (bra)  LOC103838240 (bra)  LOC123128006 (tae)  LOC123137618 (tae)  LOC123145101 (tae)  LOC123403987 (hvu) 
Subcellular
localization
wolf
chlo 9  (predict for NP_001319313.1)
chlo 10  (predict for NP_850971.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_001319313.1)
chlo 9  (predict for NP_850971.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with ISPF on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
9.7 APE1 acclimation of photosynthesis to environment [detail] 833856
8.9 AT2G27290 FAM210B-like protein, putative (DUF1279) [detail] 817272
8.8 AT5G65840 Thioredoxin superfamily protein [detail] 836713
8.7 DEG1 DegP protease 1 [detail] 822416
8.6 AT5G17560 BolA-like family protein [detail] 831622
8.5 AT4G32590 2Fe-2S ferredoxin-like superfamily protein [detail] 829394
8.3 AT1G27385 phosphoribosylformylglycinamidine synthase [detail] 839628
8.0 AT5G37360 LOW protein: ammonium transporter 1-like protein [detail] 833710
7.6 AT2G43945 uncharacterized protein [detail] 818999
7.4 AT1G68660 Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein [detail] 843196
7.2 AT4G27390 uncharacterized protein [detail] 828847
6.6 AT1G78620 integral membrane protein (Protein of unknown function DUF92, transmembrane) [detail] 844198
6.6 AT1G02475 Polyketide cyclase/dehydrase and lipid transport superfamily protein [detail] 839236
6.5 NSI nuclear shuttle interacting [detail] 840099
6.5 HISN5B HISTIDINE BIOSYNTHESIS 5B [detail] 827149
6.4 ABCI14 trigalactosyldiacylglycerol 1 [detail] 838568
4.6 GrxC5 Glutaredoxin family protein [detail] 828994
Coexpressed
gene list		 [Coexpressed gene list for ISPF]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260324_at
260324_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260324_at
260324_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260324_at
260324_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 842700      
Refseq ID (protein) NP_001319313.1 
NP_850971.1 


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