[←][→] ath   At1g65660 Gene
functional annotation
Function   Pre-mRNA splicing Prp18-interacting factor  
GO BP
GO:0008284 [list] [network] positive regulation of cell population proliferation  (27 genes)  IMP  
GO:0008380 [list] [network] RNA splicing  (191 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0030628 [list] [network] pre-mRNA 3'-splice site binding  (2 genes)  IEA  
GO:0003727 [list] [network] single-stranded RNA binding  (55 genes)  TAS  
KEGG ath03040 [list] [network] Spliceosome (203 genes)
Protein NP_564859.2 
BLAST NP_564859.2 
Orthologous [Ortholog page] SMP2 (ath)  LOC4344572 (osa)  LOC7453862 (ppo)  LOC7484720 (ppo)  LOC25499261 (mtr)  LOC100778457 (gma)  LOC100797503 (gma)  LOC101252328 (sly)  LOC101260949 (sly)  LOC103833762 (bra)  LOC103836599 (bra)  LOC103844304 (bra)  LOC123147479 (tae)  LOC123159366 (tae)  LOC123169807 (tae)  LOC123407575 (hvu) 
Subcellular
localization
wolf
nucl 6,  cyto 1,  mito 1  (predict for NP_564859.2)
Subcellular
localization
TargetP
other 7  (predict for NP_564859.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 5
Genes directly connected with SMP1 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
8.0 AT4G19190 zinc knuckle (CCHC-type) family protein [detail] 827658
8.0 CDC5 cell division cycle 5 [detail] 837506
7.7 CHR11 chromatin-remodeling protein 11 [detail] 819814
6.4 GTE6 general transcription factor group E6 [detail] 824393
6.2 AT5G50780 Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein [detail] 835150
Coexpressed
gene list		 [Coexpressed gene list for SMP1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
264633_at
264633_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
264633_at
264633_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
264633_at
264633_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 842877      
Refseq ID (protein) NP_564859.2 


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