[←][→] ath   AT1G66730 Gene
functional annotation
Function   DNA LIGASE 6  
GO BP
GO:0006273 [list] [network] lagging strand elongation  (4 genes)  IBA  
GO:0006266 [list] [network] DNA ligation  (7 genes)  IBA  
GO:0006303 [list] [network] double-strand break repair via nonhomologous end joining  (16 genes)  IMP  
GO:0009845 [list] [network] seed germination  (93 genes)  IMP  
GO:0006281 [list] [network] DNA repair  (295 genes)  IBA IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IBA  
GO MF
GO:0003910 [list] [network] DNA ligase (ATP) activity  (4 genes)  IBA  
KEGG
Protein NP_176845.2 
BLAST NP_176845.2 
Orthologous [Ortholog page] LOC4324149 (osa)  LOC7477456 (ppo)  LOC11442607 (mtr)  LOC100266816 (vvi)  LOC100807673 (gma)  LOC101249429 (sly)  LOC103651343 (zma)  LOC103831125 (bra) 
Subcellular
localization
wolf
nucl 9,  cyto 1,  cysk 1  (predict for NP_176845.2)
Subcellular
localization
TargetP
chlo 9,  other 3  (predict for NP_176845.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with LIG6 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.0 AT1G50970 Membrane trafficking VPS53 family protein [detail] 841519
5.8 REV1 DNA-directed DNA polymerase [detail] 834504
5.4 PTM PHD type transcription factor with transmembrane domain protein (PTM) [detail] 833475
4.7 AT2G24690 Transcriptional factor B3 family protein [detail] 817005
Coexpressed
gene list		 [Coexpressed gene list for LIG6]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
256374_at
256374_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
256374_at
256374_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
256374_at
256374_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 842991      
Refseq ID (protein) NP_176845.2 


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