[][] ath   AT1G67750 Gene
functional annotation
Function   Pectate lyase family protein
GO BP
GO:0045490 [list] [network] pectin catabolic process  (96 genes)  IEA  
GO CC
GO:0005576 [list] [network] extracellular region  (3363 genes)  ISM  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  HDA  
GO MF
GO:0030570 [list] [network] pectate lyase activity  (24 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
KEGG ath00040 [list] [network] Pentose and glucuronate interconversions (96 genes)
Protein NP_564906.1 
BLAST NP_564906.1 
Orthologous [Ortholog page] 9612 (sly)AT3G07010 (ath)AT3G24230 (ath)AT3G24670 (ath)AT3G27400 (ath)AT4G13210 (ath)AT4G13710 (ath)AT4G24780 (ath)AT5G48900 (ath)AT5G63180 (ath)LOC4335013 (osa)LOC7453817 (ppo)LOC7458080 (ppo)LOC7460526 (ppo)LOC7467675 (ppo)LOC7469382 (ppo)LOC7481246 (ppo)LOC7488611 (ppo)LOC7494805 (ppo)LOC11408829 (mtr)LOC11409358 (mtr)LOC11411484 (mtr)LOC11413286 (mtr)LOC11426383 (mtr)LOC25483116 (mtr)LOC25489517 (mtr)LOC100101868 (gma)PL1 (vvi)PEL (vvi)LOC100242302 (vvi)LOC100243265 (vvi)LOC100251082 (vvi)LOC100273705 (zma)LOC100281162 (zma)LOC100781845 (gma)LOC100782388 (gma)LOC100790659 (gma)LOC100794814 (gma)LOC100803068 (gma)LOC100809277 (gma)LOC100810380 (gma)LOC100816256 (gma)LOC101244298 (sly)LOC101252082 (sly)PL (sly)LOC101254639 (sly)LOC101263458 (sly)LOC103828610 (bra)LOC103828688 (bra)LOC103831011 (bra)LOC103831201 (bra)LOC103833411 (bra)LOC103834896 (bra)LOC103836561 (bra)LOC103836991 (bra)LOC103837270 (bra)LOC103837461 (bra)LOC103852424 (bra)LOC103854567 (bra)LOC103861505 (bra)LOC103862557 (bra)LOC103863605 (bra)LOC103863641 (bra)LOC103870710 (bra)LOC103873738 (bra)LOC103875221 (bra)
Subcellular
localization
wolf
extr 4,  vacu 4,  mito 1,  chlo 1,  golg 1,  cyto_mito 1,  mito_plas 1  (predict for NP_564906.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_564906.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00040 Pentose and glucuronate interconversions 5
ath00500 Starch and sucrose metabolism 2
Genes directly connected with AT1G67750 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
7.2 AT1G04680 Pectin lyase-like superfamily protein [detail] 839452
6.4 AT3G22540 hypothetical protein (DUF1677) [detail] 821825
6.2 DRT100 Leucine-rich repeat (LRR) family protein [detail] 820441
5.8 GH9B1 glycosyl hydrolase 9B1 [detail] 843408
4.1 EDA18 RING/U-box superfamily protein [detail] 818057
Coexpressed
gene list
[Coexpressed gene list for AT1G67750]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
245196_at
245196_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
245196_at
245196_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
245196_at
245196_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 843100    
Refseq ID (protein) NP_564906.1 


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