[←][→] ath   At1g70310 Gene
functional annotation
Function   spermidine synthase 2    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0008295 [list] [network] spermidine biosynthetic process  (5 genes)  IDA  
GO CC
GO:0005886 [list] [network] plasma membrane  (2529 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2559 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0004766 [list] [network] spermidine synthase activity  (3 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG ath00270 [list] [network] Cysteine and methionine metabolism (124 genes)
ath00330 [list] [network] Arginine and proline metabolism (54 genes)
ath00480 [list] [network] Glutathione metabolism (103 genes)
Protein NP_177188.1 
BLAST NP_177188.1 
Orthologous [Ortholog page] SPDSY (sly)  SPDS1 (ath)  LOC4342996 (osa)  LOC7459055 (ppo)  LOC7471485 (ppo)  LOC11405952 (mtr)  LOC25501297 (mtr)  LOC100776863 (gma)  LOC100788406 (gma)  LOC100790506 (gma)  LOC100792085 (gma)  LOC100792107 (gma)  LOC100809346 (gma)  LOC100812978 (gma)  LOC101263807 (sly)  LOC103829257 (bra)  LOC103835646 (bra)  LOC103840733 (bra)  LOC123152085 (tae)  LOC123152095 (tae)  LOC123157056 (tae)  LOC123162541 (tae)  LOC123165222 (tae)  LOC123165347 (tae)  LOC123411768 (hvu) 
Subcellular
localization
wolf
nucl 4,  cyto 4,  cysk 1  (predict for NP_177188.1)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for NP_177188.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 5
ath03013 Nucleocytoplasmic transport 2
ath00270 Cysteine and methionine metabolism 2
ath00330 Arginine and proline metabolism 2
ath00480 Glutathione metabolism 2
Genes directly connected with SPDS2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.3 SPDS1 spermidine synthase [detail] 838993
5.6 AT1G19600 pfkB-like carbohydrate kinase family protein [detail] 838547
5.6 AT1G25260 Ribosomal protein L10 family protein [detail] 839109
Coexpressed
gene list		 [Coexpressed gene list for SPDS2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
264317_at
264317_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
264317_at
264317_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
264317_at
264317_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 843367      
Refseq ID (protein) NP_177188.1 


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