ATTED-II : GeneID search result

[←][→] ath AT1G71080 Gene

functional annotation

Function

RNA polymerase II transcription elongation factor

GO BP

GO:0006414 [list] [network] translational elongation	(693 genes)	IEA
GO:0006355 [list] [network] regulation of transcription, DNA-templated	(1984 genes)	IEA

GO CC

GO:0032783 [list] [network] ELL-EAF complex	(2 genes)	IEA
GO:0005634 [list] [network] nucleus	(10793 genes)	ISM

GO MF

GO:0003746 [list] [network] translation elongation factor activity

(48 genes)

IEA

KEGG

Protein

NP_565010.1

BLAST

NP_565010.1

Orthologous

[Ortholog page] LOC4324047 (osa) LOC7459796 (ppo) LOC7487366 (ppo) LOC7488390 (ppo) LOC11411164 (mtr) LOC100191143 (zma) LOC100243360 (vvi) LOC100272267 (zma) LOC100787712 (gma) LOC100796208 (gma) LOC101261379 (sly) LOC103831637 (bra)

Subcellular
localization
wolf

nucl 9

(predict for NP_565010.1)

Subcellular
localization
TargetP

other 8

(predict for NP_565010.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	5

Genes directly connected with AT1G71080 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
7.4	AT2G02160	CCCH-type zinc finger family protein	[detail]	814747
6.3	CDC5	cell division cycle 5	[detail]	837506
6.3	NINJA	Putative interactor of JAZ	[detail]	829012

Coexpressed
gene list

[Coexpressed gene list for AT1G71080]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

259756_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

259756_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

259756_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	843448
Refseq ID (protein)	NP_565010.1

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