[][] ath   At1g72440 Gene
functional annotation
Function   CCAAT-binding factor Plant GARDENPlant GARDEN JBrowse
GO BP
GO:0010197 [list] [network] polar nucleus fusion  (32 genes)  IMP  
GO:0051302 [list] [network] regulation of cell division  (78 genes)  IMP  
GO:0009553 [list] [network] embryo sac development  (163 genes)  IMP  
GO:0009555 [list] [network] pollen development  (376 genes)  IMP  
GO CC
GO:0005654 [list] [network] nucleoplasm  (253 genes)  IDA  
GO:0005730 [list] [network] nucleolus  (387 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_177388.2 
BLAST NP_177388.2 
Orthologous [Ortholog page] LOC4346414 (osa)LOC11409943 (mtr)LOC11415122 (mtr)LOC18094686 (ppo)LOC100802669 (gma)LOC100814566 (gma)LOC101248558 (sly)LOC103831752 (bra)LOC123127603 (tae)LOC123137338 (tae)LOC123144705 (tae)LOC123404678 (hvu)
Subcellular
localization
wolf
nucl 7,  cyto 1,  mito 1,  pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_177388.2)
Subcellular
localization
TargetP
scret 5,  chlo 3  (predict for NP_177388.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 4
Genes directly connected with EDA25 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
14.7 AT3G16840 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 820937
14.4 OLI2 S-adenosyl-L-methionine-dependent methyltransferases superfamily protein [detail] 835690
14.0 AT2G18220 Noc2p family [detail] 816337
12.4 AT2G21440 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 816683
Coexpressed
gene list
[Coexpressed gene list for EDA25]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260425_at
260425_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260425_at
260425_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
260425_at
260425_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 843576    
Refseq ID (protein) NP_177388.2 


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