[←][→] ath   At1g73060 Gene
functional annotation
Function   Low PSII Accumulation 3    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010207 [list] [network] photosystem II assembly  (27 genes)  IMP  
GO CC
GO:0009571 [list] [network] proplastid stroma  (1 genes)  IDA  
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_565054.1 
BLAST NP_565054.1 
Orthologous [Ortholog page] LOC4328085 (osa)  LOC11423735 (mtr)  LOC18094255 (ppo)  LOC100803725 (gma)  LOC101257480 (sly)  LOC103831796 (bra)  LOC123131773 (tae)  LOC123402823 (hvu) 
Subcellular
localization
wolf
chlo 10  (predict for NP_565054.1)
Subcellular
localization
TargetP
chlo 8  (predict for NP_565054.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 5
ath00710 Carbon fixation in photosynthetic organisms 4
ath01230 Biosynthesis of amino acids 4
ath00010 Glycolysis / Gluconeogenesis 3
ath00480 Glutathione metabolism 2
Genes directly connected with LPA3 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
11.1 AT2G27680 NAD(P)-linked oxidoreductase superfamily protein [detail] 817314
10.8 DHAR3 dehydroascorbate reductase 1 [detail] 831532
8.3 PGK1 phosphoglycerate kinase 1 [detail] 820461
7.7 AT1G13820 alpha/beta-Hydrolases superfamily protein [detail] 837943
7.5 GSTL2 glutathione transferase lambda 2 [detail] 824670
6.6 MSRB2 methionine sulfoxide reductase B 2 [detail] 828274
5.9 PAA1 P-type ATP-ase 1 [detail] 829490
Coexpressed
gene list		 [Coexpressed gene list for LPA3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262368_at
262368_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262368_at
262368_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262368_at
262368_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 843637      
Refseq ID (protein) NP_565054.1 


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