| functional annotation |
| Function |
alpha dioxygenase |
|
| GO BP |
|
GO:0001676 [list] [network] long-chain fatty acid metabolic process
|
(14 genes)
|
IDA
|
 |
|
GO:0031408 [list] [network] oxylipin biosynthetic process
|
(23 genes)
|
IEA
|
|
|
GO:0010150 [list] [network] leaf senescence
|
(111 genes)
|
IEP
|
|
|
GO:0006631 [list] [network] fatty acid metabolic process
|
(238 genes)
|
IDA
|
|
|
GO:0006979 [list] [network] response to oxidative stress
|
(442 genes)
|
IEA
|
|
|
GO:0055114 [list] [network] oxidation-reduction process
|
(1468 genes)
|
IDA
IEA
|
|
|
| GO CC |
|
GO:0005576 [list] [network] extracellular region
|
(3363 genes)
|
ISM
|
|
|
| GO MF |
|
GO:0004601 [list] [network] peroxidase activity
|
(131 genes)
|
IEA
|
|
|
GO:0051213 [list] [network] dioxygenase activity
|
(147 genes)
|
IDA
|
|
|
GO:0020037 [list] [network] heme binding
|
(328 genes)
|
IEA
|
|
|
GO:0046872 [list] [network] metal ion binding
|
(3180 genes)
|
IEA
|
|
|
| KEGG |
ath00592 [list] [network] alpha-Linolenic acid metabolism (44 genes) |
 |
| Protein |
NP_001185393.1
NP_001322742.1
NP_001322743.1
NP_177509.1
|
| BLAST |
NP_001185393.1
NP_001322742.1
NP_001322743.1
NP_177509.1
|
| Orthologous |
[Ortholog page]
alpha-DOX2 (sly)
LOC7486739 (ppo)
LOC11412210 (mtr)
LOC100260995 (vvi)
LOC103830737 (bra)
LOC103831843 (bra)
LOC103852857 (bra)
|
Subcellular
localization
wolf |
|
E.R. 5,
chlo 1,
nucl 1,
mito 1,
plas 1,
extr 1,
vacu 1,
nucl_plas 1,
mito_plas 1
|
(predict for NP_001185393.1)
|
|
cyto 4,
golg 2,
cyto_pero 2,
cyto_plas 2
|
(predict for NP_001322742.1)
|
|
chlo 2,
E.R. 2,
pero 1,
chlo_mito 1,
E.R._vacu 1,
E.R._plas 1,
cyto_E.R. 1
|
(predict for NP_001322743.1)
|
|
E.R. 4,
chlo 1,
vacu 1,
nucl 1,
cyto 1,
mito 1,
extr 1,
cyto_nucl 1
|
(predict for NP_177509.1)
|
|
Subcellular
localization
TargetP |
|
other 5,
scret 4
|
(predict for NP_001185393.1)
|
|
other 8
|
(predict for NP_001322742.1)
|
|
other 7
|
(predict for NP_001322743.1)
|
|
other 5,
scret 4
|
(predict for NP_177509.1)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
| KEGG* ID |
Title |
#genes |
Link to the KEGG* map
(Multiple genes) |
| ath01200 |
Carbon metabolism |
6 |
 |
| ath01230 |
Biosynthesis of amino acids |
4 |
 |
| ath00010 |
Glycolysis / Gluconeogenesis |
3 |
 |
| ath00030 |
Pentose phosphate pathway |
3 |
 |
| ath00051 |
Fructose and mannose metabolism |
2 |
 |
Genes directly connected with ALPHA DOX2 on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
Entrez Gene ID* |
| 4.3 |
AT3G19000 |
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein |
[detail] |
821433 |
| 4.0 |
ALDH11A3 |
aldehyde dehydrogenase 11A3 |
[detail] |
816962 |
| 3.9 |
CYP71B28 |
cytochrome P450, family 71, subfamily B, polypeptide 28 |
[detail] |
837866 |
|
Coexpressed
gene list |
[Coexpressed gene list for ALPHA DOX2]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AtGenExpress*
(Development) |
260060_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress*
(Stress) |
260060_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress*
(Hormone) |
260060_at
X axis is samples (xls file), and Y axis is log-expression.
|
AT1G73680 Gene
