[←][→] ath   AT1G73960 Gene
functional annotation
Function   TBP-associated factor 2  
GO BP
GO:0006367 [list] [network] transcription initiation from RNA polymerase II promoter  (29 genes)  IBA  
GO:0045944 [list] [network] positive regulation of transcription by RNA polymerase II  (206 genes)  IBA  
GO CC
GO:0005669 [list] [network] transcription factor TFIID complex  (19 genes)  IBA  
GO:0009506 [list] [network] plasmodesma  (962 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0008237 [list] [network] metallopeptidase activity  (69 genes)  IEA  
GO:0003682 [list] [network] chromatin binding  (126 genes)  IBA  
GO:0008270 [list] [network] zinc ion binding  (554 genes)  IEA  
GO:0044212 [list] [network] transcription regulatory region DNA binding  (871 genes)  IBA  
KEGG ath03022 [list] [network] Basal transcription factors (55 genes)
Protein NP_001319379.1  NP_001320977.1  NP_177536.2 
BLAST NP_001319379.1  NP_001320977.1  NP_177536.2 
Orthologous [Ortholog page] LOC4347029 (osa)  LOC25481544 (mtr)  LOC25497809 (mtr)  LOC100266355 (vvi)  LOC100792795 (gma)  LOC100803129 (gma)  LOC101259036 (sly)  LOC103634102 (zma)  LOC103831869 (bra)  LOC112417880 (mtr) 
Subcellular
localization
wolf
nucl 4,  cyto 2,  chlo 1,  cyto_plas 1  (predict for NP_001319379.1)
nucl 6,  cyto 4  (predict for NP_001320977.1)
nucl 6,  cyto 2,  cysk 1  (predict for NP_177536.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001319379.1)
other 6  (predict for NP_001320977.1)
other 8  (predict for NP_177536.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03013 RNA transport 3
ath03015 mRNA surveillance pathway 2
ath03022 Basal transcription factors 2
Genes directly connected with TAF2 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.5 HAF01 HAC13 protein (HAC13) [detail] 840169
9.4 THO2 THO2 [detail] 839081
8.6 GTE4 global transcription factor group E4 [detail] 837133
7.7 CHR23 homeotic protein regulator [detail] 832051
6.3 EICBP.B ethylene induced calmodulin binding protein [detail] 830800
6.3 AT5G58450 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 835958
5.3 SDG14 SET domain protein 14 [detail] 825347
Coexpressed
gene list		 [Coexpressed gene list for TAF2]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260374_at
260374_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260374_at
260374_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260374_at
260374_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 843733      
Refseq ID (protein) NP_001319379.1 
NP_001320977.1 
NP_177536.2 


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