[←][→] ath   At1g75850 Gene
functional annotation
Function   VPS35 homolog B      
GO BP
GO CC
GO:0005829 [list] [network] cytosol  (2559 genes)  ISS  
GO:0005622 [list] [network] intracellular anatomical structure  (21148 genes)  ISS  
GO MF
KEGG ath04144 [list] [network] Endocytosis (158 genes)
Protein NP_001321274.1  NP_177713.3 
BLAST NP_001321274.1  NP_177713.3 
Orthologous [Ortholog page] VPS35A (ath)  VPS35C (ath)  LOC4334459 (osa)  LOC7485605 (ppo)  LOC7496914 (ppo)  LOC11413082 (mtr)  LOC11423814 (mtr)  LOC18099161 (ppo)  LOC100775573 (gma)  LOC100778365 (gma)  LOC100809289 (gma)  LOC100811902 (gma)  LOC101243768 (sly)  LOC101249253 (sly)  LOC101265987 (sly)  LOC103832036 (bra)  LOC103841052 (bra)  LOC103845916 (bra)  LOC123105482 (tae)  LOC123123265 (tae)  LOC123452787 (hvu) 
Subcellular
localization
wolf
cyto 3,  chlo 2,  E.R. 2,  cyto_nucl 2  (predict for NP_001321274.1)
nucl 2,  cyto 2,  cyto_nucl 2,  chlo 1,  plas 1,  E.R. 1,  cyto_pero 1,  E.R._plas 1  (predict for NP_177713.3)
Subcellular
localization
TargetP
other 6,  scret 3  (predict for NP_001321274.1)
other 9  (predict for NP_177713.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
ath04136 Autophagy - other 2
Genes directly connected with VPS35B on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
7.2 AT5G06120 ARM repeat superfamily protein [detail] 830499
6.7 AT1G69340 appr-1-p processing enzyme family protein [detail] 843266
6.6 MEE13 myosin heavy chain-like protein [detail] 815956
6.0 AT3G53930 Protein kinase superfamily protein [detail] 824560
5.3 ARI8 IBR domain-containing protein [detail] 842854
4.7 AT4G24100 Protein kinase superfamily protein [detail] 828510
Coexpressed
gene list		 [Coexpressed gene list for VPS35B]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262695_at
262695_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262695_at
262695_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262695_at
262695_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 843918      
Refseq ID (protein) NP_001321274.1 
NP_177713.3 


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