[←][→] ath   At1g76170 Gene
functional annotation
Function   2-thiocytidine tRNA biosynthesis protein, TtcA    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0034227 [list] [network] tRNA thio-modification  (3 genes)  IEA  
GO:0002098 [list] [network] tRNA wobble uridine modification  (8 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0000049 [list] [network] tRNA binding  (7 genes)  IEA  
KEGG ath04122 [list] [network] Sulfur relay system (13 genes)
Protein NP_001321958.1  NP_001321959.1  NP_001321960.1  NP_001321961.1  NP_001321962.1  NP_001321963.1  NP_177744.2 
BLAST NP_001321958.1  NP_001321959.1  NP_001321960.1  NP_001321961.1  NP_001321962.1  NP_001321963.1  NP_177744.2 
Orthologous [Ortholog page] ROL5 (ath)  LOC4330815 (osa)  LOC7477123 (ppo)  LOC9269998 (osa)  LOC11420450 (mtr)  LOC100816096 (gma)  LOC101268304 (sly)  LOC103832066 (bra)  LOC103866783 (bra)  LOC123103746 (tae)  LOC123116180 (tae)  LOC123124802 (tae)  LOC123397176 (hvu) 
Subcellular
localization
wolf
cyto 5,  chlo 3,  extr 1,  cysk 1,  golg 1  (predict for NP_001321958.1)
cyto 4,  extr 2,  cyto_pero 2,  cyto_plas 2  (predict for NP_001321959.1)
cyto 5,  chlo 3,  extr 1,  cysk 1,  golg 1  (predict for NP_001321960.1)
cyto 8,  chlo 1,  E.R. 1,  golg 1  (predict for NP_001321961.1)
cyto 6,  chlo 1,  nucl 1,  extr 1,  cysk 1,  golg 1,  chlo_mito 1,  cysk_nucl 1  (predict for NP_001321962.1)
cyto 5,  chlo 3,  extr 1,  cysk 1,  golg 1  (predict for NP_001321963.1)
cyto 6,  chlo 1,  nucl 1,  extr 1,  pero 1,  golg 1  (predict for NP_177744.2)
Subcellular
localization
TargetP
other 6  (predict for NP_001321958.1)
other 6  (predict for NP_001321959.1)
other 6  (predict for NP_001321960.1)
other 9  (predict for NP_001321961.1)
scret 6,  other 3  (predict for NP_001321962.1)
other 6  (predict for NP_001321963.1)
other 9  (predict for NP_177744.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT1G76170 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.2 AT1G73350 ankyrin repeat protein [detail] 843670
6.7 AT5G45760 Transducin/WD40 repeat-like superfamily protein [detail] 834615
6.2 NHX8 Na+/H+ exchanger 8 [detail] 838028
5.5 AT3G56300 Cysteinyl-tRNA synthetase, class Ia family protein [detail] 824797
Coexpressed
gene list		 [Coexpressed gene list for AT1G76170]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
267397_at
267397_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
267397_at
267397_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
267397_at
267397_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 843949      
Refseq ID (protein) NP_001321958.1 
NP_001321959.1 
NP_001321960.1 
NP_001321961.1 
NP_001321962.1 
NP_001321963.1 
NP_177744.2 


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