[←][→] ath   At1g76500 Gene
functional annotation
Function   Putative AT-hook DNA-binding family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009640 [list] [network] photomorphogenesis  (80 genes)  IMP  
GO:0010228 [list] [network] vegetative to reproductive phase transition of meristem  (287 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA  
GO MF
GO:0003680 [list] [network] minor groove of adenine-thymine-rich DNA binding  (19 genes)  IDA  
GO:0043621 [list] [network] protein self-association  (109 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_177776.1 
BLAST NP_177776.1 
Orthologous [Ortholog page] AGF2 (ath)  AHL20 (ath)  AGF1 (ath)  ESC (ath)  LOC4331173 (osa)  LOC4346339 (osa)  LOC7458128 (ppo)  LOC7467535 (ppo)  LOC7471741 (ppo)  LOC7485665 (ppo)  LOC7487693 (ppo)  LOC7487974 (ppo)  LOC7492425 (ppo)  LOC18098174 (ppo)  LOC25483016 (mtr)  LOC25484399 (mtr)  LOC25489330 (mtr)  LOC100778715 (gma)  LOC100787100 (gma)  LOC100791954 (gma)  LOC100798994 (gma)  LOC100804543 (gma)  LOC100811243 (gma)  LOC101244283 (sly)  LOC101248201 (sly)  LOC101252037 (sly)  LOC101268318 (sly)  LOC102663643 (gma)  LOC102667174 (gma)  LOC103828491 (bra)  LOC103829405 (bra)  LOC103830018 (bra)  LOC103830610 (bra)  LOC103832112 (bra)  LOC103835769 (bra)  LOC103841468 (bra)  LOC103853030 (bra)  LOC103863150 (bra)  LOC103863517 (bra)  LOC103872877 (bra)  LOC123078471 (tae)  LOC123082528 (tae)  LOC123085966 (tae)  LOC123094124 (tae)  LOC123095556 (tae)  LOC123129048 (tae)  LOC123130133 (tae)  LOC123135103 (tae)  LOC123135718 (tae)  LOC123140923 (tae)  LOC123142183 (tae)  LOC123163873 (tae)  LOC123402961 (hvu)  LOC123403681 (hvu)  LOC123405116 (hvu)  LOC123408099 (hvu)  LOC123446795 (hvu)  LOC123450265 (hvu) 
Subcellular
localization
wolf
nucl 8,  vacu 1,  E.R. 1,  E.R._vacu 1,  cyto_pero 1  (predict for NP_177776.1)
Subcellular
localization
TargetP
other 7,  mito 3  (predict for NP_177776.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with SOB3 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.7 ESC Putative AT-hook DNA-binding family protein [detail] 838683
7.3 AHL22 AT-hook motif nuclear-localized protein 22 [detail] 819151
6.5 AT3G24240 Leucine-rich repeat receptor-like protein kinase family protein [detail] 822011
5.5 AT5G14690 uncharacterized protein [detail] 831321
Coexpressed
gene list		 [Coexpressed gene list for SOB3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259966_at
259966_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259966_at
259966_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259966_at
259966_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 843983      
Refseq ID (protein) NP_177776.1 


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