[←][→] ath   At1g76630 Gene
functional annotation
Function   Tetratricopeptide repeat (TPR)-like superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0070478 [list] [network] nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay  (2 genes)  IMP  
GO:1904278 [list] [network] positive regulation of wax biosynthetic process  (7 genes)  IGI  
GO:0006401 [list] [network] RNA catabolic process  (49 genes)  IEA  
GO:0016441 [list] [network] post-transcriptional gene silencing  (105 genes)  IMP  
GO CC
GO:0055087 [list] [network] Ski complex  (2 genes)  IDA  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  IDA ISM  
GO MF
KEGG ath03018 [list] [network] RNA degradation (113 genes)
Protein NP_001185412.1  NP_001321499.1  NP_177789.2 
BLAST NP_001185412.1  NP_001321499.1  NP_177789.2 
Orthologous [Ortholog page] LOC4349298 (osa)  LOC7474535 (ppo)  LOC25494462 (mtr)  LOC100779830 (gma)  LOC101247817 (sly)  LOC103832123 (bra)  LOC123051585 (tae)  LOC123127559 (tae)  LOC123181591 (tae)  LOC123438108 (hvu) 
Subcellular
localization
wolf
nucl 4,  plas 3,  cyto 1,  golg_plas 1,  cysk_plas 1  (predict for NP_001185412.1)
nucl 4,  plas 2,  cysk_nucl 2,  cyto 1,  cysk_plas 1,  mito_plas 1  (predict for NP_001321499.1)
nucl 6,  cyto 3,  cysk_nucl 3,  nucl_plas 3  (predict for NP_177789.2)
Subcellular
localization
TargetP
other 9  (predict for NP_001185412.1)
other 7,  scret 3  (predict for NP_001321499.1)
other 9  (predict for NP_177789.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT1G76630 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.6 AT5G07630 lipid transporter [detail] 830656
7.1 AT4G38120 ARM repeat superfamily protein [detail] 829968
7.0 AT4G17020 transcription factor-like protein [detail] 827410
4.9 AT3G21100 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 821662
Coexpressed
gene list		 [Coexpressed gene list for AT1G76630]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
259973_at
259973_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
259973_at
259973_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
259973_at
259973_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 843996      
Refseq ID (protein) NP_001185412.1 
NP_001321499.1 
NP_177789.2 


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