[][] ath   AT1G78060 Gene
functional annotation
Function   Glycosyl hydrolase family protein
GO BP
GO:0031222 [list] [network] arabinan catabolic process  (8 genes)  IBA  
GO:0045493 [list] [network] xylan catabolic process  (13 genes)  IBA  
GO CC
GO:0009505 [list] [network] plant-type cell wall  (220 genes)  IBA IDA  
GO:0048046 [list] [network] apoplast  (443 genes)  IDA  
GO:0005618 [list] [network] cell wall  (685 genes)  IDA  
GO:0009506 [list] [network] plasmodesma  (962 genes)  IDA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA ISM  
GO MF
GO:0009044 [list] [network] xylan 1,4-beta-xylosidase activity  (12 genes)  IBA  
GO:0046556 [list] [network] alpha-L-arabinofuranosidase activity  (12 genes)  IBA  
KEGG
Protein NP_177929.1 
BLAST NP_177929.1 
Orthologous [Ortholog page] LOC4330750 (osa)LOC7463208 (ppo)LOC7495143 (ppo)LOC11432485 (mtr)LOC11436086 (mtr)LOC25489424 (mtr)LOC100191418 (zma)LOC100262668 (vvi)LOC100265962 (vvi)LOC100780688 (gma)LOC100801565 (gma)LOC100812757 (gma)Arf/Xyl3 (sly)Arf/Xyl4 (sly)LOC101264005 (sly)LOC103832229 (bra)
Subcellular
localization
wolf
plas 5,  golg_plas 4,  vacu 2,  golg 1  (predict for NP_177929.1)
Subcellular
localization
TargetP
scret 6  (predict for NP_177929.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04145 Phagosome 2
ath00190 Oxidative phosphorylation 2
Genes directly connected with AT1G78060 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
5.5 AT4G30020 PA-domain containing subtilase family protein [detail] 829125
5.3 GLX1 glyoxalase/bleomycin resistance protein/dioxygenase superfamily protein [detail] 837731
5.1 BGAL5 beta-galactosidase 5 [detail] 841080
Coexpressed
gene list
[Coexpressed gene list for AT1G78060]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262181_at
262181_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262181_at
262181_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
262181_at
262181_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 844141    
Refseq ID (protein) NP_177929.1 


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