[←][→] ath   At1g78120 Gene
functional annotation
Function   Tetratricopeptide repeat (TPR)-like superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0010087 [list] [network] phloem or xylem histogenesis  (158 genes)  IEA  
GO:0044036 [list] [network] cell wall macromolecule metabolic process  (190 genes)  IEA  
GO:0010073 [list] [network] meristem maintenance  (230 genes)  IEA  
GO:0048507 [list] [network] meristem development  (457 genes)  IEA  
GO:0019748 [list] [network] secondary metabolic process  (766 genes)  IEA  
GO:0005975 [list] [network] carbohydrate metabolic process  (844 genes)  IEA  
GO:0009415 [list] [network] response to water  (1079 genes)  IEA  
GO:0043436 [list] [network] oxoacid metabolic process  (1714 genes)  IEA  
GO CC
GO:0005739 [list] [network] mitochondrion  (4228 genes)  HDA  
GO MF
KEGG
Protein NP_001322855.1  NP_177936.1 
BLAST NP_001322855.1  NP_177936.1 
Orthologous [Ortholog page] LOC103830537 (bra) 
Subcellular
localization
wolf
chlo 4,  nucl 4,  extr 1,  cysk 1  (predict for NP_001322855.1)
chlo 4,  nucl 4,  cyto 1,  cysk 1  (predict for NP_177936.1)
Subcellular
localization
TargetP
other 3  (predict for NP_001322855.1)
other 3  (predict for NP_177936.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with TPR12 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.8 LBD4 LOB domain-containing protein 4 [detail] 840020
6.3 OFP1 ovate family protein 1 [detail] 831813
6.2 CYP735A2 cytochrome P450, family 735, subfamily A, polypeptide 2 [detail] 843031
4.6 XTH20 xyloglucan endotransglucosylase/hydrolase 20 [detail] 834859
3.8 EDA21 embryo sac development arrest 21 [detail] 826940
3.8 AT5G14230 ankyrin [detail] 831273
Coexpressed
gene list		 [Coexpressed gene list for TPR12]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260053_at
260053_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260053_at
260053_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260053_at
260053_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 844148      
Refseq ID (protein) NP_001322855.1 
NP_177936.1 


The preparation time of this page was 0.5 [sec].