[←][→] ath   AT1G79950 Gene
functional annotation
Function   RAD3-like DNA-binding helicase protein  
GO BP
GO:0090657 [list] [network] telomeric loop disassembly  (1 genes)  IBA  
GO:1904430 [list] [network] negative regulation of t-circle formation  (1 genes)  IBA  
GO:0043007 [list] [network] maintenance of rDNA  (3 genes)  IGI  
GO:0010569 [list] [network] regulation of double-strand break repair via homologous recombination  (8 genes)  IBA  
GO:0045910 [list] [network] negative regulation of DNA recombination  (18 genes)  IBA IMP  
GO:0032508 [list] [network] DNA duplex unwinding  (29 genes)  IBA  
GO:0000723 [list] [network] telomere maintenance  (36 genes)  IMP  
GO:0000725 [list] [network] recombinational repair  (73 genes)  IMP  
GO:0009555 [list] [network] pollen development  (337 genes)  IGI  
GO:0048364 [list] [network] root development  (482 genes)  IMP  
GO CC
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  IBA ISM  
GO MF
GO:0070182 [list] [network] DNA polymerase binding  (5 genes)  IBA  
GO:0005524 [list] [network] ATP binding  (2003 genes)  IBA  
KEGG
Protein NP_001321157.1  NP_001321158.1  NP_001321159.1  NP_001321160.1  NP_001321161.1  NP_001321162.1  NP_178113.3 
BLAST NP_001321157.1  NP_001321158.1  NP_001321159.1  NP_001321160.1  NP_001321161.1  NP_001321162.1  NP_178113.3 
Orthologous [Ortholog page] LOC4326378 (osa)  LOC7472979 (ppo)  LOC11425787 (mtr)  LOC100265202 (vvi)  LOC100286037 (zma)  LOC100792904 (gma)  LOC101249902 (sly)  LOC103830408 (bra) 
Subcellular
localization
wolf
nucl 4,  chlo 4,  mito 1,  cyto_mito 1  (predict for NP_001321157.1)
nucl 4,  chlo 3,  mito 1,  plas 1,  cysk 1,  cyto_mito 1,  cysk_plas 1  (predict for NP_001321158.1)
nucl 4,  chlo 4,  mito 1,  cyto_mito 1  (predict for NP_001321159.1)
chlo 4,  nucl 4,  chlo_mito 3,  mito 1,  cyto_mito 1  (predict for NP_001321160.1)
chlo 4,  nucl 4,  chlo_mito 3,  mito 1,  cyto_mito 1  (predict for NP_001321161.1)
nucl 4,  chlo 4,  mito 1,  cyto_mito 1  (predict for NP_001321162.1)
nucl 4,  chlo 3,  mito 1,  plas 1,  cysk 1,  cyto_mito 1,  cysk_plas 1  (predict for NP_178113.3)
Subcellular
localization
TargetP
mito 5,  other 4  (predict for NP_001321157.1)
mito 5,  other 4  (predict for NP_001321158.1)
mito 5,  other 4  (predict for NP_001321159.1)
mito 5,  other 4  (predict for NP_001321160.1)
mito 5,  other 4  (predict for NP_001321161.1)
mito 5,  other 4  (predict for NP_001321162.1)
mito 5,  other 4  (predict for NP_178113.3)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 4
ath03410 Base excision repair 2
Genes directly connected with AT1G79950 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.8 CHR17 chromatin remodeling factor17 [detail] 831980
6.2 MMH-1 MUTM homolog-1 [detail] 841681
6.2 ATX2 trithorax-like protein 2 [detail] 837093
5.5 AT1G48360 zinc ion binding/nucleic acid binding/hydrolase [detail] 841256
Coexpressed
gene list		 [Coexpressed gene list for AT1G79950]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262066_at
262066_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262066_at
262066_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262066_at
262066_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 844335      
Refseq ID (protein) NP_001321157.1 
NP_001321158.1 
NP_001321159.1 
NP_001321160.1 
NP_001321161.1 
NP_001321162.1 
NP_178113.3 


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