[←][→] ath   AT1G79990 Gene
functional annotation
Function   coatomer subunit beta-2  
GO BP
GO CC
GO:0000139 [list] [network] Golgi membrane  (404 genes)  IEA  
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  HDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  ISM  
GO MF
GO:0005198 [list] [network] structural molecule activity  (369 genes)  IEA  
KEGG
Protein NP_001154478.1  NP_001154480.1 
BLAST NP_001154478.1  NP_001154480.1 
Orthologous [Ortholog page] AT3G15980 (ath)  AT1G52360 (ath)  LOC4328693 (osa)  LOC4328694 (osa)  LOC4340097 (osa)  LOC7472972 (ppo)  LOC7483508 (ppo)  LOC25487934 (mtr)  LOC25491385 (mtr)  LOC100216577 (zma)  LOC100247411 (vvi)  LOC100261812 (vvi)  LOC100383405 (zma)  LOC100383977 (zma)  LOC100797508 (gma)  LOC100804239 (gma)  LOC100815780 (gma)  LOC100818132 (gma)  LOC101247229 (sly)  LOC101247999 (sly)  LOC101264409 (sly)  LOC103638095 (zma)  LOC103654814 (zma)  LOC103830410 (bra)  LOC103833520 (bra)  LOC103840347 (bra)  LOC103861416 (bra)  LOC103868507 (bra) 
Subcellular
localization
wolf
chlo 2,  nucl 2,  cyto 2,  mito 2,  cyto_nucl 2,  chlo_mito 2  (predict for NP_001154478.1)
chlo 3,  nucl 2,  cyto 2,  cyto_nucl 2,  chlo_mito 2  (predict for NP_001154480.1)
Subcellular
localization
TargetP
mito 6,  other 4  (predict for NP_001154478.1)
mito 6,  other 4  (predict for NP_001154480.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 2
Genes directly connected with AT1G79990 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.7 ACBP4 acyl-CoA binding protein 4 [detail] 819707
8.8 AT2G21390 Coatomer, alpha subunit [detail] 816678
8.6 AT3G15980 Coatomer, beta' subunit [detail] 820842
8.3 MAP70-1 microtubule-associated proteins 70-1 [detail] 843134
8.2 AT5G11980 conserved oligomeric Golgi complex component-related / COG complex component-like protein [detail] 831071
8.2 AT5G04420 Galactose oxidase/kelch repeat superfamily protein [detail] 830321
7.8 ORP1D OSBP(oxysterol binding protein)-related protein 1D [detail] 837875
7.6 AT5G47490 RGPR-like protein [detail] 834799
6.8 AT5G45560 Pleckstrin homology (PH) domain-containing protein / lipid-binding START domain-containing protein [detail] 834592
6.5 AT1G05350 NAD(P)-binding Rossmann-fold superfamily protein [detail] 837034
5.9 AT1G35220 FAM91 carboxy-terminus protein [detail] 840411
5.4 AT4G19900 alpha 1,4-glycosyltransferase family protein [detail] 827735
Coexpressed
gene list		 [Coexpressed gene list for AT1G79990]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
262058_at
262058_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
262058_at
262058_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
262058_at
262058_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 844339      
Refseq ID (protein) NP_001154478.1 
NP_001154480.1 


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