[←][→] ath   AT1G80270 Gene
functional annotation
Function   PENTATRICOPEPTIDE REPEAT 596  
GO BP
GO CC
GO:0009941 [list] [network] chloroplast envelope  (666 genes)  IDA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  IBA IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO MF
KEGG
Protein NP_001077853.1  NP_001321806.1  NP_001321807.1  NP_178143.1  NP_974190.1 
BLAST NP_001077853.1  NP_001321806.1  NP_001321807.1  NP_178143.1  NP_974190.1 
Orthologous [Ortholog page] LOC778342 (sly)  AT3G15590 (ath)  AT1G15480 (ath)  LOC4326909 (osa)  LOC4342742 (osa)  LOC4351621 (osa)  LOC7464096 (ppo)  LOC7479672 (ppo)  LOC11416123 (mtr)  LOC11429425 (mtr)  LOC100252030 (vvi)  LOC100281211 (zma)  LOC100500196 (gma)  LOC100805354 (gma)  LOC100806780 (gma)  LOC103632127 (zma)  LOC103650031 (zma)  LOC103830428 (bra)  LOC103869899 (bra)  LOC103872343 (bra) 
Subcellular
localization
wolf
mito 5,  chlo 4,  cyto_mito 3  (predict for NP_001077853.1)
mito 5,  chlo 4,  cyto_mito 3  (predict for NP_001321806.1)
mito 5,  chlo 4,  cyto_mito 3  (predict for NP_001321807.1)
mito 5,  chlo 4,  cyto_mito 3  (predict for NP_178143.1)
mito 5,  chlo 4,  cyto_mito 3  (predict for NP_974190.1)
Subcellular
localization
TargetP
mito 8  (predict for NP_001077853.1)
mito 8  (predict for NP_001321806.1)
mito 8  (predict for NP_001321807.1)
mito 8  (predict for NP_178143.1)
mito 8  (predict for NP_974190.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03008 Ribosome biogenesis in eukaryotes 7
Genes directly connected with PPR596 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
14.0 AT5G02050 Mitochondrial glycoprotein family protein [detail] 831729
13.5 AT3G18600 P-loop containing nucleoside triphosphate hydrolases superfamily protein [detail] 821391
13.0 AT4G04940 transducin family protein / WD-40 repeat family protein [detail] 825833
12.1 AT1G30960 GTP-binding family protein [detail] 839983
11.1 AT3G02650 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 821285
11.0 PYRD pyrimidine d [detail] 832394
10.5 PRMT1A protein arginine methyltransferase 1A [detail] 816486
10.5 TIM50 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein [detail] 842040
10.5 AT2G18330 AAA-type ATPase family protein [detail] 816348
10.1 AT1G02370 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 837735
8.8 AT4G01990 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 828172
8.1 AT3G18240 Ribosomal protein S24/S35 [detail] 821352
Coexpressed
gene list		 [Coexpressed gene list for PPR596]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
260331_at
260331_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
260331_at
260331_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
260331_at
260331_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 844367      
Refseq ID (protein) NP_001077853.1 
NP_001321806.1 
NP_001321807.1 
NP_178143.1 
NP_974190.1 


The preparation time of this page was 0.2 [sec].