[←][→] ath   At2g01940 Gene
functional annotation
Function   C2H2-like zinc finger protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009590 [list] [network] detection of gravity  (3 genes)  IMP  
GO:0010031 [list] [network] circumnutation  (6 genes)  IMP  
GO:0010601 [list] [network] positive regulation of auxin biosynthetic process  (7 genes)  IGI  
GO:2000904 [list] [network] regulation of starch metabolic process  (17 genes)  IMP  
GO:0009959 [list] [network] negative gravitropism  (25 genes)  IMP  
GO:2000012 [list] [network] regulation of auxin polar transport  (33 genes)  IGI  
GO:0009958 [list] [network] positive gravitropism  (39 genes)  IMP  
GO:0048444 [list] [network] floral organ morphogenesis  (48 genes)  IGI  
GO:0009965 [list] [network] leaf morphogenesis  (102 genes)  IGI  
GO:0009630 [list] [network] gravitropism  (103 genes)  IGI  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1656 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1576 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001030949.2  NP_001077868.1  NP_178303.2 
BLAST NP_001030949.2  NP_001077868.1  NP_178303.2 
Orthologous [Ortholog page] IDD16 (ath)  IDD14 (ath)  LOC4345790 (osa)  LOC4347215 (osa)  LOC7454015 (ppo)  LOC7471448 (ppo)  LOC9270511 (osa)  LOC18102538 (ppo)  LOC18105581 (ppo)  LOC100785333 (gma)  LOC100791007 (gma)  LOC100795754 (gma)  LOC100798167 (gma)  LOC100800187 (gma)  LOC100806138 (gma)  LOC101245262 (sly)  LOC101250383 (sly)  LOC101262550 (sly)  LOC101268284 (sly)  LOC103827538 (bra)  LOC103830985 (bra)  LOC103831230 (bra)  LOC103835441 (bra)  LOC103839462 (bra)  LOC103840548 (bra)  LOC103854029 (bra)  LOC120575947 (mtr)  LOC120577731 (mtr)  LOC123085224 (tae)  LOC123092840 (tae)  LOC123098125 (tae)  LOC123103928 (tae)  LOC123112158 (tae)  LOC123121699 (tae)  LOC123398917 (hvu)  LOC123446730 (hvu) 
Subcellular
localization
wolf
nucl 6,  mito 2,  plas 1,  extr 1  (predict for NP_001030949.2)
nucl 9  (predict for NP_001077868.1)
nucl 10  (predict for NP_178303.2)
Subcellular
localization
TargetP
mito 7,  other 5  (predict for NP_001030949.2)
chlo 8  (predict for NP_001077868.1)
chlo 8  (predict for NP_178303.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
Genes directly connected with SGR5 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.6 AT3G48550 SHOOT GRAVITROPISM-like protein [detail] 824014
7.2 IDD14 indeterminate(ID)-domain 14 [detail] 843141
5.6 PRA1.F1 prenylated RAB acceptor 1.F1 [detail] 838346
4.8 AT1G28310 Dof-type zinc finger DNA-binding family protein [detail] 839725
3.6 AT1G30280 Chaperone DnaJ-domain superfamily protein [detail] 839908
Coexpressed
gene list		 [Coexpressed gene list for SGR5]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
265249_at
265249_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
265249_at
265249_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
265249_at
265249_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 814725      
Refseq ID (protein) NP_001030949.2 
NP_001077868.1 
NP_178303.2 


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