[←][→] ath   At2g02160 Gene
functional annotation
Function   CCCH-type zinc finger family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0045893 [list] [network] positive regulation of DNA-templated transcription  (272 genes)  IDA  
GO:0032870 [list] [network] cellular response to hormone stimulus  (1136 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1535 genes)  HDA IDA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_027420.1 
BLAST NP_027420.1 
Orthologous [Ortholog page] LOC4337362 (osa)  LOC7462628 (ppo)  LOC7471466 (ppo)  LOC100787836 (gma)  LOC101253884 (sly)  LOC101257295 (sly)  LOC102669253 (gma)  LOC103854015 (bra)  LOC120577334 (mtr)  LOC123047322 (tae)  LOC123055125 (tae)  LOC123190978 (tae)  LOC123428406 (hvu) 
Subcellular
localization
wolf
nucl 10  (predict for NP_027420.1)
Subcellular
localization
TargetP
other 7,  mito 3  (predict for NP_027420.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
Genes directly connected with AT2G02160 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
14.8 CDC5 cell division cycle 5 [detail] 837506
11.1 AT3G11450 DnaJ and Myb-like DNA-binding domain-containing protein [detail] 820318
10.0 AT3G49601 pre-mRNA-splicing factor [detail] 6241216
9.5 TGH SWAP (Suppressor-of-White-APricot)/surp domain-containing protein [detail] 832372
9.1 AT1G65280 DNAJ heat shock N-terminal domain-containing protein [detail] 842835
8.7 AT3G47610 transcription regulator/ zinc ion binding protein [detail] 823915
7.7 AT2G24830 zinc finger (CCCH-type) family protein / D111/G-patch domain-containing protein [detail] 817020
7.4 AT1G04780 Ankyrin repeat family protein [detail] 839414
7.1 AT1G71080 RNA polymerase II transcription elongation factor [detail] 843448
6.7 AT1G80550 Pentatricopeptide repeat (PPR) superfamily protein [detail] 844394
Coexpressed
gene list		 [Coexpressed gene list for AT2G02160]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
266121_at
266121_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
266121_at
266121_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
266121_at
266121_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 814747      
Refseq ID (protein) NP_027420.1 


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