[←][→] ath   At2g04025 Gene
functional annotation
Function   root meristem growth factor    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0009786 [list] [network] regulation of asymmetric cell division  (15 genes)  ISS  
GO:0008284 [list] [network] positive regulation of cell population proliferation  (27 genes)  IDA  
GO:2000023 [list] [network] regulation of lateral root development  (29 genes)  ISS  
GO:2000067 [list] [network] regulation of root morphogenesis  (34 genes)  ISS  
GO:0010082 [list] [network] regulation of root meristem growth  (39 genes)  IGI ISS  
GO:0010628 [list] [network] positive regulation of gene expression  (71 genes)  IEP  
GO:0030154 [list] [network] cell differentiation  (1176 genes)  IDA  
GO CC
GO:0005615 [list] [network] extracellular space  (45 genes)  ISS  
GO:0005576 [list] [network] extracellular region  (3154 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10305 genes)  ISM  
GO MF
GO:0008083 [list] [network] growth factor activity  (8 genes)  IDA IEA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001324399.1  NP_178486.2 
BLAST NP_001324399.1  NP_178486.2 
Orthologous [Ortholog page] LOC103853918 (bra) 
Subcellular
localization
wolf
nucl 10  (predict for NP_001324399.1)
extr 4,  vacu 3,  chlo 2  (predict for NP_178486.2)
Subcellular
localization
TargetP
other 8  (predict for NP_001324399.1)
scret 9  (predict for NP_178486.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with RGF3 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.8 AT1G33750 Terpenoid cyclases/Protein prenyltransferases superfamily protein [detail] 840266
9.6 PLT1 Integrase-type DNA-binding superfamily protein [detail] 821632
8.7 RGF4 root meristem growth factor-like protein [detail] 822736
8.1 AT1G56680 Chitinase family protein [detail] 842124
6.8 ATGSTF13 Glutathione S-transferase family protein [detail] 825451
4.8 AGL21 AGAMOUS-like 21 [detail] 829950
4.6 AT3G20590 Late embryogenesis abundant (LEA) hydroxyproline-rich glycoprotein family [detail] 821606
4.5 RTFL15 ROTUNDIFOLIA like 15 [detail] 5007840
4.2 AT1G26680 transcriptional factor B3 family protein [detail] 839209
3.3 AT1G78520 Carbohydrate-binding X8 domain superfamily protein [detail] 844188
Coexpressed
gene list		 [Coexpressed gene list for RGF3]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
263481_at
263481_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
263481_at
263481_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
263481_at
263481_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 814929      
Refseq ID (protein) NP_001324399.1 
NP_178486.2 


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