[←][→] ath   At2g06000 Gene
functional annotation
Function   Pentatricopeptide repeat (PPR) superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO MF
KEGG
Protein NP_178657.1  NP_973429.1 
BLAST NP_178657.1  NP_973429.1 
Orthologous [Ortholog page] LOC4335965 (osa)  LOC7460070 (ppo)  LOC18100335 (ppo)  LOC25486513 (mtr)  LOC25491979 (mtr)  LOC100788338 (gma)  LOC100798448 (gma)  LOC100816463 (gma)  LOC101262963 (sly)  LOC103828504 (bra)  LOC103838334 (bra)  LOC123045585 (tae)  LOC123053421 (tae)  LOC123189327 (tae)  LOC123426835 (hvu) 
Subcellular
localization
wolf
chlo 8,  mito 1,  cyto_mito 1  (predict for NP_178657.1)
chlo 8,  mito 1,  cyto_mito 1  (predict for NP_973429.1)
Subcellular
localization
TargetP
other 3  (predict for NP_178657.1)
other 3  (predict for NP_973429.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT2G06000 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.0 AT1G22960 Pentatricopeptide repeat (PPR) superfamily protein [detail] 838903
7.4 AT3G60050 Pentatricopeptide repeat (PPR) superfamily protein [detail] 825175
7.2 AT3G26850 histone-lysine N-methyltransferase [detail] 822300
7.0 AT2G30780 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 817629
6.6 AT1G29710 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 839848
6.2 AT5G15570 Bromodomain transcription factor [detail] 831410
5.5 AT3G20890 RNA-binding (RRM/RBD/RNP motifs) family protein [detail] 821638
5.0 HSFA1D heat shock transcription factor A1D [detail] 840125
Coexpressed
gene list		 [Coexpressed gene list for AT2G06000]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
266028_at
266028_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
266028_at
266028_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
266028_at
266028_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 815153      
Refseq ID (protein) NP_178657.1 
NP_973429.1 


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