functional annotation |
Function |
callose synthase 5 |
|
GO BP |
GO:0006075 [list] [network] (1->3)-beta-D-glucan biosynthetic process
|
(12 genes)
|
IMP
|
|
GO:0009556 [list] [network] microsporogenesis
|
(24 genes)
|
IMP
|
|
GO:0008360 [list] [network] regulation of cell shape
|
(34 genes)
|
IEA
|
|
GO:0080092 [list] [network] regulation of pollen tube growth
|
(36 genes)
|
IMP
|
|
GO:0010208 [list] [network] pollen wall assembly
|
(42 genes)
|
IMP
|
|
GO:0009846 [list] [network] pollen germination
|
(67 genes)
|
IMP
|
|
GO:0009860 [list] [network] pollen tube growth
|
(129 genes)
|
IMP
|
|
GO:0071555 [list] [network] cell wall organization
|
(538 genes)
|
IEA
|
|
|
GO CC |
GO:0000148 [list] [network] 1,3-beta-D-glucan synthase complex
|
(12 genes)
|
IEA
|
|
GO:0016021 [list] [network] integral component of membrane
|
(4803 genes)
|
IEA
|
|
GO:0009507 [list] [network] chloroplast
|
(5095 genes)
|
ISM
|
|
|
GO MF |
GO:0003843 [list] [network] 1,3-beta-D-glucan synthase activity
|
(12 genes)
|
IEA
|
|
|
KEGG |
|
|
Protein |
NP_849953.2
|
BLAST |
NP_849953.2
|
Orthologous |
[Ortholog page]
LOC4340315 (osa)
LOC11418933 (mtr)
LOC11443064 (mtr)
LOC100248918 (vvi)
LOC100501270 (zma)
LOC100777245 (gma)
LOC100777985 (gma)
LOC100779472 (gma)
LOC101249782 (sly)
LOC103837634 (bra)
|
Subcellular localization wolf |
chlo 3,
cyto 3,
plas 3,
cyto_plas 3
|
(predict for NP_849953.2)
|
|
Subcellular localization TargetP |
chlo 4,
other 3
|
(predict for NP_849953.2)
|
|
Gene coexpression |
Network*for coexpressed genes |
KEGG* ID |
Title |
#genes |
Link to the KEGG* map (Multiple genes) |
ath03013 |
RNA transport |
3 |
|
ath03015 |
mRNA surveillance pathway |
3 |
|
ath03018 |
RNA degradation |
3 |
|
ath00040 |
Pentose and glucuronate interconversions |
2 |
|
Genes directly connected with CALS5 on the network
coex z* |
Locus |
Function* |
Coexpression detail |
Entrez Gene ID* |
4.8 |
PAB3 |
poly(A) binding protein 3 |
[detail] |
838882 |
4.8 |
sks12 |
SKU5 similar 12 |
[detail] |
842006 |
4.8 |
AT3G28790 |
transmembrane protein, putative (DUF1216) |
[detail] |
822511 |
4.5 |
PAB5 |
poly(A)-binding protein 5 |
[detail] |
843507 |
4.2 |
PAB7 |
poly(A) binding protein 7 |
[detail] |
818238 |
3.8 |
XIC |
Myosin family protein with Dil domain-containing protein |
[detail] |
837394 |
|
Coexpressed gene list |
[Coexpressed gene list for CALS5]
|
Gene expression |
All samples |
[Expression pattern for all samples]
|
AtGenExpress* (Development) |
264112_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress* (Stress) |
264112_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress* (Hormone) |
264112_at
X axis is samples (xls file), and Y axis is log-expression.
|