ATTED-II : GeneID search result

[←][→] ath AT2G15820 Gene

functional annotation

Function

endonuclease

GO BP

GO:0010239 [list] [network] chloroplast mRNA processing	(8 genes)	IMP
GO:0006388 [list] [network] tRNA splicing, via endonucleolytic cleavage and ligation	(10 genes)	IMP
GO:0048564 [list] [network] photosystem I assembly	(16 genes)	IBA IMP
GO:0000373 [list] [network] Group II intron splicing	(24 genes)	IBA IMP
GO:0045292 [list] [network] mRNA cis splicing, via spliceosome	(38 genes)	IBA

GO CC

GO:0009507 [list] [network] chloroplast	(5095 genes)	ISM
GO:0005634 [list] [network] nucleus	(10793 genes)	ISM

GO MF

GO:0004519 [list] [network] endonuclease activity

(145 genes)

IEA

KEGG

Protein

NP_565382.4

BLAST

NP_565382.4

Orthologous

[Ortholog page] LOC4330440 (osa) LOC7457516 (ppo) LOC25480983 (mtr) LOC25482209 (mtr) LOC100258959 (vvi) LOC100382871 (zma) LOC100803872 (gma) LOC100807730 (gma) LOC101246211 (sly) LOC103844343 (bra)

Subcellular
localization
wolf

chlo 6, nucl 2, cyto 1, plas 1, cyto_plas 1

(predict for NP_565382.4)

Subcellular
localization
TargetP

chlo 7

(predict for NP_565382.4)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with OTP51 on the network
coex z^*	Locus	Function^*	Coexpression detail	Entrez Gene ID^*
6.2	AT4G37380	Tetratricopeptide repeat (TPR)-like superfamily protein	[detail]	829892
6.1	EMB1006	Pentatricopeptide repeat (PPR) superfamily protein	[detail]	835093
5.9	EMB25	DEAD/DEAH box helicase	[detail]	843343

Coexpressed
gene list

[Coexpressed gene list for OTP51]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

265484_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

265484_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

265484_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	816078
Refseq ID (protein)	NP_565382.4

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