[←][→] ath   At2g16485 Gene
functional annotation
Function   GW repeat- and PHD finger-containing protein NERD      
GO BP
GO:0010964 [list] [network] regulation of small non-coding RNA-mediated heterochromatin formation  (1 genes)  IDA  
GO:0032776 [list] [network] DNA methylation on cytosine  (18 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  ISM  
GO MF
GO:0042393 [list] [network] histone binding  (66 genes)  IDA  
GO:0003677 [list] [network] DNA binding  (1277 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_001324854.1  NP_179241.4 
BLAST NP_001324854.1  NP_179241.4 
Orthologous [Ortholog page] AT3G51120 (ath)  LOC4349095 (osa)  LOC7470025 (ppo)  LOC7480162 (ppo)  LOC7494298 (ppo)  LOC9269757 (osa)  LOC11411608 (mtr)  LOC18099224 (ppo)  LOC25494556 (mtr)  LOC100801151 (gma)  LOC100810823 (gma)  LOC100815079 (gma)  LOC101248841 (sly)  LOC101249239 (sly)  LOC101250266 (sly)  LOC103837769 (bra)  LOC103841028 (bra)  LOC103860692 (bra)  LOC120579645 (mtr)  LOC121174757 (gma)  LOC123104525 (tae)  LOC123112805 (tae)  LOC123122289 (tae)  LOC123400050 (hvu)  LOC123434274 (hvu) 
Subcellular
localization
wolf
nucl 10  (predict for NP_001324854.1)
nucl 10  (predict for NP_179241.4)
Subcellular
localization
TargetP
other 7,  chlo 3  (predict for NP_001324854.1)
other 7,  chlo 3  (predict for NP_179241.4)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03250 Viral life cycle - HIV-1 2
Genes directly connected with NERD on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
10.4 SDG2 SET domain protein 2 [detail] 827183
10.2 GTB1 global transcription factor group B1 [detail] 842855
10.1 HAF01 HAC13 protein (HAC13) [detail] 840169
9.6 HB-1 homeobox-1 [detail] 839740
Coexpressed
gene list		 [Coexpressed gene list for NERD]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
263605_at
263605_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
263605_at
263605_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
263605_at
263605_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 816147      
Refseq ID (protein) NP_001324854.1 
NP_179241.4 


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