[←][→] ath   At2g16880 Gene
functional annotation
Function   Pentatricopeptide repeat (PPR) superfamily protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (5004 genes)  ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1535 genes)  IDA  
KEGG
Protein NP_179280.1 
BLAST NP_179280.1 
Orthologous [Ortholog page] LOC7458638 (ppo)  LOC9271741 (osa)  LOC25484953 (mtr)  LOC100808380 (gma)  LOC103846017 (bra)  LOC104645441 (sly)  LOC123084980 (tae)  LOC123093077 (tae)  LOC123098366 (tae)  LOC123449408 (hvu) 
Subcellular
localization
wolf
cyto 5,  nucl 3,  chlo 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_179280.1)
Subcellular
localization
TargetP
other 7  (predict for NP_179280.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT2G16880 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.6 PPR40 pentatricopeptide (PPR) domain protein 40 [detail] 820944
6.5 AT5G15010 Tetratricopeptide repeat (TPR)-like superfamily protein [detail] 831353
6.3 AT5G39900 Small GTP-binding protein [detail] 833987
Coexpressed
gene list		 [Coexpressed gene list for AT2G16880]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
266529_at
266529_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
266529_at
266529_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
266529_at
266529_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 816189      
Refseq ID (protein) NP_179280.1 


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