[←][→] ath   AT2G17970 Gene
functional annotation
Function   2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein  
GO BP
GO:0070988 [list] [network] demethylation  (27 genes)  IDA  
GO:0016032 [list] [network] viral process  (63 genes)  IEA  
GO:0006402 [list] [network] mRNA catabolic process  (80 genes)  IMP  
GO:0055114 [list] [network] oxidation-reduction process  (1468 genes)  IEA  
GO CC
GO:0000932 [list] [network] P-body  (56 genes)  IDA  
GO:0009506 [list] [network] plasmodesma  (962 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0032451 [list] [network] demethylase activity  (23 genes)  IDA  
GO:0051213 [list] [network] dioxygenase activity  (147 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (1026 genes)  IDA  
GO:0046872 [list] [network] metal ion binding  (3180 genes)  IEA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_001077911.1  NP_001189546.1  NP_001324029.1  NP_001324030.1  NP_001324031.1  NP_001324032.1  NP_001324033.1  NP_001324034.1  NP_001324035.1  NP_179387.1 
BLAST NP_001077911.1  NP_001189546.1  NP_001324029.1  NP_001324030.1  NP_001324031.1  NP_001324032.1  NP_001324033.1  NP_001324034.1  NP_001324035.1  NP_179387.1 
Orthologous [Ortholog page] AT4G36090 (ath)  AT1G48980 (ath)  LOC4340053 (osa)  LOC7480182 (ppo)  LOC25481974 (mtr)  LOC100250563 (vvi)  LOC100787321 (gma)  LOC100797674 (gma)  LOC101253354 (sly)  LOC101258324 (sly)  LOC103638106 (zma)  LOC103844373 (bra)  LOC103870848 (bra)  LOC103871430 (bra) 
Subcellular
localization
wolf
nucl 10  (predict for NP_001077911.1)
nucl 10  (predict for NP_001189546.1)
nucl 9  (predict for NP_001324029.1)
nucl 6,  chlo 1,  mito 1,  chlo_mito 1  (predict for NP_001324030.1)
nucl 9  (predict for NP_001324031.1)
nucl 6,  chlo 1,  mito 1,  chlo_mito 1  (predict for NP_001324032.1)
nucl 6,  cyto 2,  cysk 1  (predict for NP_001324033.1)
nucl 10  (predict for NP_001324034.1)
nucl 8,  cyto 2  (predict for NP_001324035.1)
nucl 10  (predict for NP_179387.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001077911.1)
other 9  (predict for NP_001189546.1)
other 7  (predict for NP_001324029.1)
other 7  (predict for NP_001324030.1)
other 7  (predict for NP_001324031.1)
other 7  (predict for NP_001324032.1)
other 9  (predict for NP_001324033.1)
other 9  (predict for NP_001324034.1)
other 7  (predict for NP_001324035.1)
other 7  (predict for NP_179387.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
Genes directly connected with AT2G17970 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
5.7 AT2G43465 RNA-binding ASCH domain protein [detail] 7922418
5.3 AT2G22530 Alkaline-phosphatase-like family protein [detail] 816786
5.3 AT4G02485 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein [detail] 827953
4.8 SRF1 STRUBBELIG-receptor family 1 [detail] 816618
4.6 AT5G54890 RNA-binding CRS1 / YhbY (CRM) domain-containing protein [detail] 835580
Coexpressed
gene list		 [Coexpressed gene list for AT2G17970]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
257389_at
257389_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
257389_at
257389_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
257389_at
257389_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 816307      
Refseq ID (protein) NP_001077911.1 
NP_001189546.1 
NP_001324029.1 
NP_001324030.1 
NP_001324031.1 
NP_001324032.1 
NP_001324033.1 
NP_001324034.1 
NP_001324035.1 
NP_179387.1 


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