[←][→] ath   AT2G18710 Gene
functional annotation
Function   SECY homolog 1  
GO BP
GO:0006616 [list] [network] SRP-dependent cotranslational protein targeting to membrane, translocation  (9 genes)  IBA  
GO:0010027 [list] [network] thylakoid membrane organization  (49 genes)  ISS  
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (373 genes)  IBA IDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA ISM  
GO MF
GO:0008320 [list] [network] protein transmembrane transporter activity  (44 genes)  IBA  
GO:0005048 [list] [network] signal sequence binding  (49 genes)  IBA  
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG ath03060 [list] [network] Protein export (54 genes)
ath04141 [list] [network] Protein processing in endoplasmic reticulum (211 genes)
ath04145 [list] [network] Phagosome (82 genes)
Protein NP_179461.1 
BLAST NP_179461.1 
Orthologous [Ortholog page] LOC542482 (zma)  LOC4345097 (osa)  LOC25488366 (mtr)  LOC100248517 (vvi)  LOC100810430 (gma)  LOC101263722 (sly)  LOC103828373 (bra) 
Subcellular
localization
wolf
chlo 6,  plas 2,  mito 1,  pero 1  (predict for NP_179461.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_179461.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 2
Genes directly connected with SCY1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
7.0 ATS2 Phospholipid/glycerol acyltransferase family protein [detail] 829181
6.9 AT5G52960 tRNA dimethylallyltransferase [detail] 835373
6.7 SKL1 shikimate kinase like 1 [detail] 822306
5.3 LPPepsilon2 Phosphatidic acid phosphatase (PAP2) family protein [detail] 836777
4.0 SCAMP2 Secretory carrier membrane protein (SCAMP) family protein [detail] 837659
Coexpressed
gene list		 [Coexpressed gene list for SCY1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
266018_at
266018_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
266018_at
266018_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
266018_at
266018_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 816386      
Refseq ID (protein) NP_179461.1 


The preparation time of this page was 0.2 [sec].