ATTED-II : GeneID search result

[←][→] ath At2g18710 Gene

functional annotation

Function

SECY homolog 1

GO BP

GO:0010027 [list] [network] thylakoid membrane organization

(49 genes)

ISS

GO CC

GO:0009535 [list] [network] chloroplast thylakoid membrane	(315 genes)	IDA
GO:0009507 [list] [network] chloroplast	(5004 genes)	HDA ISM

GO MF

GO:0005515 [list] [network] protein binding

(5066 genes)

IPI

KEGG

ath03060 [list] [network] Protein export (54 genes)

ath04141 [list] [network] Protein processing in endoplasmic reticulum (215 genes)

ath04145 [list] [network] Phagosome (83 genes)

Protein

NP_179461.1

BLAST

NP_179461.1

Orthologous

[Ortholog page] LOC4345097 (osa) LOC7465997 (ppo) LOC7493346 (ppo) LOC25488366 (mtr) LOC100810430 (gma) LOC101263722 (sly) LOC103828373 (bra) LOC123103281 (tae) LOC123111470 (tae) LOC123120625 (tae) LOC123399075 (hvu)

Subcellular
localization
wolf

chlo 6, plas 2, mito 1, pero 1

(predict for NP_179461.1)

Subcellular
localization
TargetP

chlo 9

(predict for NP_179461.1)

Gene coexpression

Network^*for
coexpressed
genes

[Cytoscape]

Genes directly connected with SCY1 on the network
coex z^*	Locus	Function^*	CoexViewer	Entrez Gene ID^*
8.2	SKL1	shikimate kinase like 1	[detail]	822306
7.7	ATS2	Phospholipid/glycerol acyltransferase family protein	[detail]	829181
7.5	pde191	Mitochondrial transcription termination factor family protein	[detail]	829972

Coexpressed
gene list

[Coexpressed gene list for SCY1]

Gene expression

All samples

[Expression pattern for all samples]

AtGenExpress^*
(Development)

266018_at

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress^*
(Stress)

266018_at

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress^*
(Hormone)

266018_at

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID	816386
Refseq ID (protein)	NP_179461.1

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