[←][→] ath   At2g18740 Gene
functional annotation
Function   Small nuclear ribonucleoprotein family protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:0043484 [list] [network] regulation of RNA splicing  (21 genes)  IMP  
GO:0048509 [list] [network] regulation of meristem development  (63 genes)  IMP  
GO:0008380 [list] [network] RNA splicing  (191 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10305 genes)  IDA ISM  
GO:0005737 [list] [network] cytoplasm  (13880 genes)  IDA  
GO MF
KEGG ath03040 [list] [network] Spliceosome (203 genes)
Protein NP_001077914.1  NP_179464.1 
BLAST NP_001077914.1  NP_179464.1 
Orthologous [Ortholog page] AT4G30330 (ath)  LOC4328158 (osa)  LOC4344666 (osa)  LOC11406496 (mtr)  LOC11427208 (mtr)  LOC18100540 (ppo)  LOC18107772 (ppo)  LOC100306304 (gma)  LOC100500256 (gma)  LOC100807929 (gma)  LOC100816107 (gma)  LOC101247333 (sly)  LOC101258239 (sly)  LOC103874062 (bra)  LOC123132020 (tae)  LOC123143556 (tae)  LOC123147398 (tae)  LOC123157702 (tae)  LOC123166120 (tae)  LOC123407643 (hvu) 
Subcellular
localization
wolf
mito 4,  chlo 3,  cyto_nucl 3  (predict for NP_001077914.1)
mito 5,  cyto_nucl 3,  chlo 2  (predict for NP_179464.1)
Subcellular
localization
TargetP
mito 5,  scret 3  (predict for NP_001077914.1)
mito 5,  scret 3  (predict for NP_179464.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 7
ath03020 RNA polymerase 4
ath03010 Ribosome 3
Genes directly connected with AT2G18740 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
9.3 SNRNP-G Putative small nuclear ribonucleoprotein G [detail] 816925
9.0 HMGB5 high mobility group B5 [detail] 829709
8.8 PFD6 prefoldin 6 [detail] 839878
8.3 NRPB4 RNA polymerase II, Rpb4, core protein [detail] 830853
8.2 AT2G47640 Small nuclear ribonucleoprotein family protein [detail] 819377
8.2 NRPB10 RNA polymerases N / 8 kDa subunit [detail] 837690
8.0 LSM8 Small nuclear ribonucleoprotein family protein [detail] 842881
7.2 AT5G57860 Ubiquitin-like superfamily protein [detail] 835896
6.6 AT5G63150 uncharacterized protein [detail] 836436
5.6 AE7 MIP18 family protein (DUF59) [detail] 843160
5.5 AT5G22280 peptidyl-prolyl cis-trans isomerase G [detail] 832288
4.7 MDO1 telomere-capping, CST complex subunit [detail] 842079
Coexpressed
gene list		 [Coexpressed gene list for AT2G18740]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
266074_at
266074_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
266074_at
266074_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
266074_at
266074_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 816389      
Refseq ID (protein) NP_001077914.1 
NP_179464.1 


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