| functional annotation |
| Function |
Pentatricopeptide repeat (PPR) superfamily protein |
|
| GO BP |
|
| GO CC |
|
GO:0005739 [list] [network] mitochondrion
|
(4405 genes)
|
ISM
|
 |
|
| GO MF |
|
| KEGG |
|
|
| Protein |
NP_001189552.1
NP_001325053.1
NP_001325054.1
NP_179518.1
|
| BLAST |
NP_001189552.1
NP_001325053.1
NP_001325054.1
NP_179518.1
|
| Orthologous |
[Ortholog page]
LOC100260220 (vvi)
LOC103828328 (bra)
|
Subcellular
localization
wolf |
|
chlo 8,
cyto 1,
mito 1,
E.R. 1,
cyto_E.R. 1
|
(predict for NP_001189552.1)
|
|
chlo 8,
cyto 1,
mito 1,
E.R. 1,
cyto_E.R. 1
|
(predict for NP_001325053.1)
|
|
chlo 8,
cyto 1,
mito 1,
E.R. 1,
cyto_E.R. 1
|
(predict for NP_001325054.1)
|
|
chlo 8,
cyto 1,
mito 1,
E.R. 1,
cyto_E.R. 1
|
(predict for NP_179518.1)
|
|
Subcellular
localization
TargetP |
|
mito 6,
chlo 3
|
(predict for NP_001189552.1)
|
|
mito 6,
chlo 3
|
(predict for NP_001325053.1)
|
|
mito 6,
chlo 3
|
(predict for NP_001325054.1)
|
|
mito 6,
chlo 3
|
(predict for NP_179518.1)
|
|
| Gene coexpression |
Network*for
coexpressed
genes |
Genes directly connected with AT2G19280 on the network
| coex z* |
Locus |
Function* |
Coexpression
detail |
Entrez Gene ID* |
| 7.4 |
AT1G05670 |
Pentatricopeptide repeat (PPR-like) superfamily protein |
[detail] |
837074 |
| 7.4 |
AT1G76280 |
Tetratricopeptide repeat (TPR)-like superfamily protein |
[detail] |
843961 |
| 7.4 |
AT5G65820 |
Pentatricopeptide repeat (PPR) superfamily protein |
[detail] |
836711 |
| 6.7 |
AT4G28010 |
Tetratricopeptide repeat (TPR)-like superfamily protein |
[detail] |
828915 |
| 6.7 |
AT1G62680 |
Pentatricopeptide repeat (PPR) superfamily protein |
[detail] |
842565 |
| 6.7 |
AT5G57250 |
Pentatricopeptide repeat (PPR) superfamily protein |
[detail] |
5008310 |
| 6.4 |
AT2G28050 |
Pentatricopeptide repeat (PPR) superfamily protein |
[detail] |
817349 |
| 6.4 |
RPF1 |
RNA processing FACTOR |
[detail] |
837825 |
| 6.3 |
AT4G19890 |
Pentatricopeptide repeat (PPR-like) superfamily protein |
[detail] |
10723133 |
| 6.1 |
AT5G24830 |
Tetratricopeptide repeat (TPR)-like superfamily protein |
[detail] |
832552 |
| 5.8 |
AT3G48810 |
Pentatricopeptide repeat (PPR) superfamily protein |
[detail] |
824042 |
| 5.6 |
AT1G74120 |
Mitochondrial transcription termination factor family protein |
[detail] |
843752 |
| 5.6 |
AT5G04050 |
RNA-directed DNA polymerase (reverse transcriptase) |
[detail] |
830284 |
| 5.3 |
AT3G42630 |
Pentatricopeptide repeat (PPR) superfamily protein |
[detail] |
823280 |
| 5.0 |
AT5G43820 |
Pentatricopeptide repeat (PPR) superfamily protein |
[detail] |
834404 |
|
Coexpressed
gene list |
[Coexpressed gene list for AT2G19280]
|
| Gene expression |
| All samples |
[Expression pattern for all samples]
|
AtGenExpress*
(Development) |
267331_at
X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.
|
AtGenExpress*
(Stress) |
267331_at
X axis is samples (pdf file), and Y axis is log2-expression.
|
AtGenExpress*
(Hormone) |
267331_at
X axis is samples (xls file), and Y axis is log-expression.
|
AT2G19280 Gene
