[←][→] ath   At2g20890 Gene
functional annotation
Function   photosystem II reaction center PSB29 protein    Plant GARDEN Plant GARDEN JBrowse
GO BP
GO:1902458 [list] [network] positive regulation of stomatal opening  (3 genes)  IMP  
GO:0045038 [list] [network] protein import into chloroplast thylakoid membrane  (7 genes)  IDA  
GO:0015996 [list] [network] chlorophyll catabolic process  (18 genes)  IMP  
GO:1903426 [list] [network] regulation of reactive oxygen species biosynthetic process  (18 genes)  IMP  
GO:0007186 [list] [network] G protein-coupled receptor signaling pathway  (20 genes)  IPI  
GO:0050829 [list] [network] defense response to Gram-negative bacterium  (23 genes)  IMP  
GO:0045037 [list] [network] protein import into chloroplast stroma  (24 genes)  IDA  
GO:0010207 [list] [network] photosystem II assembly  (27 genes)  TAS  
GO:0010182 [list] [network] sugar mediated signaling pathway  (38 genes)  IMP  
GO:2000070 [list] [network] regulation of response to water deprivation  (40 genes)  IMP  
GO:0010027 [list] [network] thylakoid membrane organization  (49 genes)  IMP  
GO CC
GO:0010319 [list] [network] stromule  (37 genes)  IDA  
GO:0009527 [list] [network] plastid outer membrane  (52 genes)  IDA  
GO:0009528 [list] [network] plastid inner membrane  (65 genes)  IDA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (315 genes)  HDA  
GO:0009534 [list] [network] chloroplast thylakoid  (415 genes)  HDA ISS  
GO:0009941 [list] [network] chloroplast envelope  (582 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (705 genes)  HDA  
GO:0009532 [list] [network] plastid stroma  (716 genes)  IDA  
GO:0005739 [list] [network] mitochondrion  (4228 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5004 genes)  HDA IDA ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5066 genes)  IPI  
KEGG
Protein NP_565491.1 
BLAST NP_565491.1 
Orthologous [Ortholog page] LOC543119 (tae)  LOC4343584 (osa)  LOC7494227 (ppo)  LOC7494440 (ppo)  LOC25487573 (mtr)  LOC25492064 (mtr)  LOC100779964 (gma)  LOC100792508 (gma)  LOC100796767 (gma)  LOC100814341 (gma)  LOC101253003 (sly)  LOC103842574 (bra)  LOC123044553 (tae)  LOC123188272 (tae)  LOC123425712 (hvu) 
Subcellular
localization
wolf
chlo 10  (predict for NP_565491.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_565491.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 12
Genes directly connected with PSB29 on the network
coex z* Locus Function* CoexViewer Entrez Gene ID*
10.8 PRPL35 Ribosomal protein L35 [detail] 816943
9.7 AT3G11630 Thioredoxin superfamily protein [detail] 820335
9.5 RPL21C Ribosomal protein L21 [detail] 840472
8.9 AT5G07020 proline-rich family protein [detail] 830593
Coexpressed
gene list		 [Coexpressed gene list for PSB29]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
265415_at
265415_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
265415_at
265415_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
265415_at
265415_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 816623      
Refseq ID (protein) NP_565491.1 


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