[←][→] ath   AT2G20890 Gene
functional annotation
Function   photosystem II reaction center PSB29 protein  
GO BP
GO:1902458 [list] [network] positive regulation of stomatal opening  (3 genes)  IMP  
GO:0045038 [list] [network] protein import into chloroplast thylakoid membrane  (6 genes)  IBA IDA  
GO:1903426 [list] [network] regulation of reactive oxygen species biosynthetic process  (13 genes)  IMP  
GO:0015996 [list] [network] chlorophyll catabolic process  (14 genes)  IMP  
GO:0007186 [list] [network] G protein-coupled receptor signaling pathway  (16 genes)  IPI  
GO:0010207 [list] [network] photosystem II assembly  (25 genes)  TAS  
GO:0045037 [list] [network] protein import into chloroplast stroma  (25 genes)  IBA IDA  
GO:2000070 [list] [network] regulation of response to water deprivation  (31 genes)  IMP  
GO:0010182 [list] [network] sugar mediated signaling pathway  (37 genes)  IMP  
GO:0010027 [list] [network] thylakoid membrane organization  (49 genes)  IBA IMP  
GO CC
GO:0010319 [list] [network] stromule  (33 genes)  IDA  
GO:0009707 [list] [network] chloroplast outer membrane  (55 genes)  IEA  
GO:0009527 [list] [network] plastid outer membrane  (56 genes)  IDA  
GO:0009528 [list] [network] plastid inner membrane  (83 genes)  IDA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (373 genes)  IDA  
GO:0009534 [list] [network] chloroplast thylakoid  (474 genes)  IBA IDA ISS  
GO:0009941 [list] [network] chloroplast envelope  (666 genes)  IDA  
GO:0009570 [list] [network] chloroplast stroma  (750 genes)  IDA  
GO:0009532 [list] [network] plastid stroma  (757 genes)  IDA  
GO:0005739 [list] [network] mitochondrion  (4405 genes)  HDA  
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  IDA ISM  
GO MF
GO:0005515 [list] [network] protein binding  (4605 genes)  IPI  
KEGG
Protein NP_565491.1 
BLAST NP_565491.1 
Orthologous [Ortholog page] LOC4343584 (osa)  LOC7494227 (ppo)  LOC7494440 (ppo)  LOC25487573 (mtr)  LOC25492064 (mtr)  LOC100193314 (zma)  LOC100259646 (vvi)  LOC100382672 (zma)  LOC100779964 (gma)  LOC100792508 (gma)  LOC100796767 (gma)  LOC100814341 (gma)  LOC101253003 (sly)  LOC103842574 (bra) 
Subcellular
localization
wolf
chlo 10  (predict for NP_565491.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_565491.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 9
Genes directly connected with PSB29 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
10.4 PRPL35 Ribosomal protein L35 [detail] 816943
9.7 AT3G11630 Thioredoxin superfamily protein [detail] 820335
9.3 YLMG2 YGGT family protein [detail] 832252
7.2 AT2G43945 hypothetical protein [detail] 818999
Coexpressed
gene list		 [Coexpressed gene list for PSB29]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
265415_at
265415_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
265415_at
265415_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
265415_at
265415_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 816623      
Refseq ID (protein) NP_565491.1 


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