[←][→] ath   AT2G21270 Gene
functional annotation
Function   ubiquitin fusion degradation 1  
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (436 genes)  IEA  
GO CC
GO:0005829 [list] [network] cytosol  (3506 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5095 genes)  ISM  
GO MF
KEGG ath04141 [list] [network] Protein processing in endoplasmic reticulum (211 genes)
Protein NP_001031384.1  NP_001077933.1  NP_001323741.1  NP_001323742.1  NP_565504.1 
BLAST NP_001031384.1  NP_001077933.1  NP_001323741.1  NP_001323742.1  NP_565504.1 
Orthologous [Ortholog page] AT2G29070 (ath)  AT4G38930 (ath)  LOC4328514 (osa)  LOC4336742 (osa)  LOC7485696 (ppo)  LOC7494294 (ppo)  LOC11406565 (mtr)  LOC11412947 (mtr)  LOC11415947 (mtr)  LOC11417447 (mtr)  LOC100250217 (vvi)  LOC100258971 (vvi)  LOC100282176 (zma)  LOC100282805 (zma)  LOC100781066 (gma)  LOC100799569 (gma)  LOC100803896 (gma)  LOC100807536 (gma)  LOC101248524 (sly)  LOC103842542 (bra)  LOC103864264 (bra)  LOC103864938 (bra) 
Subcellular
localization
wolf
cysk 6,  nucl 1,  mito 1  (predict for NP_001031384.1)
chlo 5,  extr 4,  cyto 1,  E.R. 1,  cyto_E.R. 1  (predict for NP_001077933.1)
cysk 6,  nucl 1,  mito 1  (predict for NP_001323741.1)
cysk 6,  nucl 1,  mito 1  (predict for NP_001323742.1)
cysk 6,  nucl 1,  mito 1  (predict for NP_565504.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001031384.1)
scret 8  (predict for NP_001077933.1)
other 8  (predict for NP_001323741.1)
other 8  (predict for NP_001323742.1)
other 8  (predict for NP_565504.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 8
ath04141 Protein processing in endoplasmic reticulum 6
ath04120 Ubiquitin mediated proteolysis 2
Genes directly connected with UFD1 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.2 RAD23D Rad23 UV excision repair protein family [detail] 833835
7.0 PBE1 20S proteasome beta subunit E1 [detail] 837863
7.0 TDX tetraticopeptide domain-containing thioredoxin [detail] 821056
6.8 AT4G38930 Ubiquitin fusion degradation UFD1 family protein [detail] 830048
6.8 UBC30 ubiquitin-conjugating enzyme 30 [detail] 835714
6.1 AT1G61150 LisH and RanBPM domains containing protein [detail] 842408
6.0 AT1G33490 E3 ubiquitin-protein ligase [detail] 840243
5.9 AT3G51100 altered inheritance of mitochondria protein [detail] 824274
Coexpressed
gene list		 [Coexpressed gene list for UFD1]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
263756_at
263756_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
263756_at
263756_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
263756_at
263756_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 816666      
Refseq ID (protein) NP_001031384.1 
NP_001077933.1 
NP_001323741.1 
NP_001323742.1 
NP_565504.1 


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