[←][→] ath   AT2G22620 Gene
functional annotation
Function   Rhamnogalacturonate lyase family protein  
GO BP
GO:0005975 [list] [network] carbohydrate metabolic process  (995 genes)  IEA  
GO CC
GO:0005576 [list] [network] extracellular region  (3363 genes)  ISM  
GO MF
GO:0030246 [list] [network] carbohydrate binding  (303 genes)  IEA  
GO:0016829 [list] [network] lyase activity  (412 genes)  IEA ISS  
KEGG
Protein NP_001189578.1  NP_001325395.1  NP_001325396.1  NP_001325397.1  NP_179847.1 
BLAST NP_001189578.1  NP_001325395.1  NP_001325396.1  NP_001325397.1  NP_179847.1 
Orthologous [Ortholog page] AT4G37950 (ath)  AT1G09890 (ath)  AT1G09910 (ath)  LOC4346274 (osa)  LOC4346275 (osa)  LOC4349697 (osa)  LOC4351416 (osa)  LOC7464763 (ppo)  LOC7467217 (ppo)  LOC7467218 (ppo)  LOC7467219 (ppo)  LOC7467220 (ppo)  LOC7476448 (ppo)  LOC7491976 (ppo)  LOC11412406 (mtr)  LOC11418533 (mtr)  LOC11422528 (mtr)  LOC11435489 (mtr)  LOC11442502 (mtr)  LOC100247189 (vvi)  LOC100776664 (gma)  LOC100786488 (gma)  LOC100791732 (gma)  LOC100793563 (gma)  LOC100814185 (gma)  LOC100814721 (gma)  LOC101248195 (sly)  LOC101248481 (sly)  LOC101250582 (sly)  LOC101260634 (sly)  LOC101262208 (sly)  LOC101267191 (sly)  LOC103643208 (zma)  LOC103654318 (zma)  LOC103831399 (bra)  LOC103835061 (bra)  LOC103837873 (bra)  LOC103871768 (bra)  LOC103871769 (bra) 
Subcellular
localization
wolf
chlo 4,  mito 1,  plas 1,  mito_plas 1,  nucl 1,  cyto 1,  extr 1,  vacu 1,  golg 1,  cyto_nucl 1,  cyto_mito 1,  cysk_plas 1,  E.R._plas 1  (predict for NP_001189578.1)
chlo 4,  mito 1,  plas 1,  mito_plas 1,  nucl 1,  cyto 1,  extr 1,  vacu 1,  golg 1,  cyto_nucl 1,  cyto_mito 1,  cysk_plas 1,  E.R._plas 1  (predict for NP_001325395.1)
chlo 2,  mito 2,  chlo_mito 2,  extr 1,  vacu 1,  mito_plas 1  (predict for NP_001325396.1)
chlo 4,  mito 1,  extr 1,  nucl 1,  cyto 1,  plas 1,  golg 1,  cyto_nucl 1,  cyto_mito 1,  nucl_plas 1,  golg_plas 1,  cyto_plas 1  (predict for NP_001325397.1)
chlo 4,  mito 1,  plas 1,  mito_plas 1,  nucl 1,  cyto 1,  extr 1,  vacu 1,  golg 1,  cyto_nucl 1,  cyto_mito 1,  cysk_plas 1,  E.R._plas 1  (predict for NP_179847.1)
Subcellular
localization
TargetP
scret 3  (predict for NP_001189578.1)
scret 3  (predict for NP_001325395.1)
scret 3  (predict for NP_001325396.1)
scret 3  (predict for NP_001325397.1)
scret 3  (predict for NP_179847.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 3
Genes directly connected with AT2G22620 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.2 AT1G03920 Protein kinase family protein [detail] 839369
5.5 AT5G65530 Protein kinase superfamily protein [detail] 836679
5.1 AT1G44970 Peroxidase superfamily protein [detail] 841062
4.3 BGAL12 beta-galactosidase 12 [detail] 828720
Coexpressed
gene list		 [Coexpressed gene list for AT2G22620]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
265350_at
265350_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
265350_at
265350_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
265350_at
265350_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 816793      
Refseq ID (protein) NP_001189578.1 
NP_001325395.1 
NP_001325396.1 
NP_001325397.1 
NP_179847.1 


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