[←][→] ath   AT2G23140 Gene
functional annotation
Function   RING/U-box superfamily protein with ARM repeat domain-containing protein  
GO BP
GO:1904821 [list] [network] chloroplast disassembly  (1 genes)  IGI  
GO:0048658 [list] [network] anther wall tapetum development  (21 genes)  IMP  
GO:0034614 [list] [network] cellular response to reactive oxygen species  (32 genes)  IGI  
GO:0048364 [list] [network] root development  (482 genes)  IGI  
GO:0016567 [list] [network] protein ubiquitination  (624 genes)  IEA IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO:0005737 [list] [network] cytoplasm  (14855 genes)  IDA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (204 genes)  IDA  
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (434 genes)  IEA  
KEGG
Protein NP_001189583.1  NP_001323987.1  NP_001323988.1  NP_001323989.1  NP_179895.6 
BLAST NP_001189583.1  NP_001323987.1  NP_001323988.1  NP_001323989.1  NP_179895.6 
Orthologous [Ortholog page] LOC4325007 (osa)  LOC4344480 (osa)  LOC25491020 (mtr)  LOC100257770 (vvi)  LOC100501378 (zma)  LOC100777715 (gma)  LOC100811250 (gma)  LOC100813786 (gma)  LOC101244851 (sly)  LOC101265159 (sly)  LOC103650913 (zma)  LOC103653150 (zma)  LOC103829511 (bra)  LOC103842428 (bra)  LOC103864624 (bra) 
Subcellular
localization
wolf
cyto 6,  chlo 4  (predict for NP_001189583.1)
plas 2,  E.R._plas 2,  nucl 2,  E.R. 1,  mito 1,  vacu 1,  golg 1,  chlo_mito 1,  cyto_mito 1,  cyto_pero 1  (predict for NP_001323987.1)
plas 2,  E.R._plas 2,  nucl 2,  E.R. 1,  mito 1,  vacu 1,  golg 1,  chlo_mito 1,  cyto_mito 1,  cyto_pero 1  (predict for NP_001323988.1)
cyto 6,  chlo 4  (predict for NP_001323989.1)
plas 2,  nucl 2,  cyto 2,  cyto_nucl 2,  E.R._plas 2  (predict for NP_179895.6)
Subcellular
localization
TargetP
other 7,  scret 3  (predict for NP_001189583.1)
other 9  (predict for NP_001323987.1)
other 9  (predict for NP_001323988.1)
other 7,  scret 3  (predict for NP_001323989.1)
other 7,  scret 4  (predict for NP_179895.6)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with PUB4 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
8.1 MUG7 MuDR family transposase [detail] 3768859
7.3 AT1G20760 Calcium-binding EF hand family protein [detail] 838666
6.6 AT1G01440 hypothetical protein (DUF3133) [detail] 837155
Coexpressed
gene list		 [Coexpressed gene list for PUB4]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
267258_at
267258_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
267258_at
267258_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
267258_at
267258_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 816846      
Refseq ID (protein) NP_001189583.1 
NP_001323987.1 
NP_001323988.1 
NP_001323989.1 
NP_179895.6 


The preparation time of this page was 0.2 [sec].