[][] ath   AT2G23630 Gene
functional annotation
Function   SKU5 similar 16
GO BP
GO:0010227 [list] [network] floral organ abscission  (26 genes)  IEP  
GO:0055114 [list] [network] oxidation-reduction process  (1468 genes)  IEA  
GO CC
GO:0005576 [list] [network] extracellular region  (3363 genes)  ISM  
GO MF
GO:0005507 [list] [network] copper ion binding  (185 genes)  IEA  
GO:0016491 [list] [network] oxidoreductase activity  (1435 genes)  IEA  
KEGG
Protein NP_001324736.1  NP_565554.1 
BLAST NP_001324736.1  NP_565554.1 
Orthologous [Ortholog page] sks15 (ath)sks17 (ath)LOC4342270 (osa)LOC7477975 (ppo)LOC7483137 (ppo)LOC11405822 (mtr)LOC25502900 (mtr)LOC25502901 (mtr)LOC100249552 (vvi)LOC100266715 (vvi)LOC100782355 (gma)LOC100792520 (gma)LOC100796699 (gma)LOC100809971 (gma)LOC100810503 (gma)LOC101252344 (sly)LOC101263571 (sly)LOC103643803 (zma)LOC103829552 (bra)LOC103837722 (bra)LOC103841069 (bra)LOC103862511 (bra)LOC103864293 (bra)LOC103864482 (bra)
Subcellular
localization
wolf
vacu 4,  extr 2,  E.R._vacu 2,  chlo 1,  plas 1  (predict for NP_001324736.1)
vacu 3,  plas 2,  E.R._vacu 2,  cyto 1,  extr 1,  E.R. 1,  cyto_E.R. 1  (predict for NP_565554.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_001324736.1)
scret 9  (predict for NP_565554.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with sks16 on the network
coex z* Locus Function* Coexpression
detail
Entrez Gene ID*
17.2 AT5G60520 Late embryogenesis abundant (LEA) protein-like protein [detail] 836173
17.1 sks15 SKU5 similar 15 [detail] 829870
14.2 AT5G10130 Pollen Ole e 1 allergen and extensin family protein [detail] 830877
12.3 AT5G58784 Undecaprenyl pyrophosphate synthetase family protein [detail] 835994
12.1 AT3G06460 GNS1/SUR4 membrane protein family [detail] 819823
10.5 AT1G05280 ERV-F (C)1 provirus ancestral Env polyprotein, putative (DUF604) [detail] 837026
10.2 AT5G62340 Plant invertase/pectin methylesterase inhibitor superfamily protein [detail] 836355
9.1 AT4G31320 SAUR-like auxin-responsive protein family [detail] 829259
8.5 AT1G56680 Chitinase family protein [detail] 842124
7.7 EIR1 Auxin efflux carrier family protein [detail] 835813
7.6 AT4G11610 C2 calcium/lipid-binding plant phosphoribosyltransferase family protein [detail] 826766
6.4 CEL5 cellulase 5 [detail] 838893
5.9 XTH5 xyloglucan endotransglucosylase/hydrolase 5 [detail] 831233
5.5 CYP87A2 cytochrome P450, family 87, subfamily A, polypeptide 2 [detail] 837830
5.1 EXPA14 expansin A14 [detail] 835731
5.0 GONST2 golgi nucleotide sugar transporter 2 [detail] 837240
Coexpressed
gene list
[Coexpressed gene list for sks16]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
267287_at
267287_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
267287_at
267287_at.png

X axis is samples (pdf file), and Y axis is log2-expression.

AtGenExpress*
(Hormone)
267287_at
267287_at.png

X axis is samples (xls file), and Y axis is log-expression.

Link to other DBs
Entrez Gene ID 816895    
Refseq ID (protein) NP_001324736.1 
NP_565554.1 


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