[←][→] ath   AT2G23780 Gene
functional annotation
Function   RING/U-box superfamily protein  
GO BP
GO:0071712 [list] [network] ER-associated misfolded protein catabolic process  (13 genes)  IBA  
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (436 genes)  IBA  
GO CC
GO:0016021 [list] [network] integral component of membrane  (4803 genes)  IEA  
GO:0005634 [list] [network] nucleus  (10793 genes)  ISM  
GO MF
GO:0044390 [list] [network] ubiquitin-like protein conjugating enzyme binding  (52 genes)  IBA  
GO:0042277 [list] [network] peptide binding  (91 genes)  IPI  
GO:0061630 [list] [network] ubiquitin protein ligase activity  (204 genes)  IBA  
KEGG ath04141 [list] [network] Protein processing in endoplasmic reticulum (211 genes)
Protein NP_001318276.1  NP_001324074.1  NP_179958.1 
BLAST NP_001318276.1  NP_001324074.1  NP_179958.1 
Orthologous [Ortholog page] AT1G19310 (ath)  LOC4325492 (osa)  LOC4333714 (osa)  LOC4352888 (osa)  LOC7478003 (ppo)  LOC7483773 (ppo)  LOC11405855 (mtr)  LOC25482097 (mtr)  LOC100194240 (zma)  LOC100217249 (zma)  LOC100245178 (vvi)  LOC100246078 (vvi)  LOC100259073 (vvi)  LOC100285907 (zma)  LOC100527488 (gma)  LOC100794086 (gma)  LOC100811423 (gma)  LOC100814783 (gma)  LOC101256837 (sly)  LOC101263175 (sly)  LOC103249148 (bra)  LOC103872727 (bra) 
Subcellular
localization
wolf
nucl 7,  cyto 1,  mito 1,  plas 1,  cyto_pero 1,  mito_plas 1,  cyto_E.R. 1  (predict for NP_001318276.1)
nucl 7,  cyto 1,  mito 1,  plas 1,  cyto_pero 1,  mito_plas 1,  cyto_E.R. 1  (predict for NP_001324074.1)
nucl 7,  cyto 1,  mito 1,  plas 1,  cyto_pero 1,  mito_plas 1,  cyto_E.R. 1  (predict for NP_179958.1)
Subcellular
localization
TargetP
other 9  (predict for NP_001318276.1)
other 9  (predict for NP_001324074.1)
other 9  (predict for NP_179958.1)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT2G23780 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
6.2 AT5G13810 Glutaredoxin family protein [detail] 831226
5.9 TOPP8 Calcineurin-like metallo-phosphoesterase superfamily protein [detail] 832846
5.8 AT2G28370 Uncharacterized protein family (UPF0497) [detail] 817385
5.4 AT2G05590 TLD-domain containing nucleolar protein [detail] 815108
Coexpressed
gene list		 [Coexpressed gene list for AT2G23780]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
267297_at
267297_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
267297_at
267297_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
267297_at
267297_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 816910      
Refseq ID (protein) NP_001318276.1 
NP_001324074.1 
NP_179958.1 


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