[←][→] ath   AT2G23900 Gene
functional annotation
Function   Pectin lyase-like superfamily protein  
GO BP
GO:0071555 [list] [network] cell wall organization  (538 genes)  IEA  
GO:0005975 [list] [network] carbohydrate metabolic process  (995 genes)  IEA  
GO CC
GO:0005576 [list] [network] extracellular region  (3363 genes)  IEA ISM  
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (52 genes)  IEA  
GO:0016829 [list] [network] lyase activity  (412 genes)  IEA  
KEGG
Protein NP_179968.2 
BLAST NP_179968.2 
Orthologous [Ortholog page] AT3G48950 (ath)  AT3G61490 (ath)  AT4G23500 (ath)  LOC4331458 (osa)  LOC4339868 (osa)  LOC7472748 (ppo)  LOC7494526 (ppo)  LOC7497216 (ppo)  LOC11408934 (mtr)  LOC11414847 (mtr)  LOC11420475 (mtr)  LOC11421560 (mtr)  LOC11422557 (mtr)  LOC25500842 (mtr)  LOC25502095 (mtr)  LOC100250814 (vvi)  LOC100255362 (vvi)  LOC100255958 (vvi)  LOC100262858 (vvi)  LOC100284735 (zma)  LOC100284797 (zma)  LOC100776827 (gma)  LOC100778404 (gma)  LOC100779166 (gma)  LOC100785005 (gma)  LOC100785841 (gma)  LOC100787980 (gma)  LOC100794916 (gma)  LOC100795453 (gma)  LOC100803375 (gma)  LOC100812836 (gma)  LOC100816232 (gma)  LOC100818998 (gma)  LOC100852885 (vvi)  LOC101247546 (sly)  LOC101255793 (sly)  LOC101258597 (sly)  LOC101265204 (sly)  LOC101265512 (sly)  LOC103841972 (bra)  LOC103861130 (bra)  LOC103861401 (bra)  LOC103864502 (bra)  LOC103873101 (bra) 
Subcellular
localization
wolf
cyto 2,  extr 2,  cyto_nucl 2,  chlo 1,  nucl 1,  chlo_mito 1,  mito 1,  plas 1,  vacu 1,  golg 1,  golg_plas 1,  mito_plas 1  (predict for NP_179968.2)
Subcellular
localization
TargetP
scret 8  (predict for NP_179968.2)
Gene coexpression
Network*for
coexpressed
genes
LCNloc
[Cytoscape]
Genes directly connected with AT2G23900 on the network
coex z* Locus Function* Coexpression
detail		 Entrez Gene ID*
15.6 AT5G60615 Defensin-like (DEFL) family protein [detail] 3771542
15.1 RALFL15 RALF-like 15 [detail] 28718292
15.1 CHX23 cation/H+ exchanger 23 [detail] 837063
11.4 PERK6 Protein kinase superfamily protein [detail] 821414
8.2 AT4G18596 Pollen Ole e 1 allergen and extensin family protein [detail] 827593
7.8 EXO70H3 exocyst subunit exo70 family protein H3 [detail] 820110
6.7 AT1G03050 ENTH/ANTH/VHS superfamily protein [detail] 839416
Coexpressed
gene list		 [Coexpressed gene list for AT2G23900]
Gene expression
All samples [Expression pattern for all samples]
AtGenExpress*
(Development)
266558_at
266558_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
"1st Q", "mean" and "3rd Q" indecate the values for all genes on a GeneChip. Q: quartile.

AtGenExpress*
(Stress)
266558_at
266558_at.png

X axis is samples (pdf file), and Y axis is log2-expression.
AtGenExpress*
(Hormone)
266558_at
266558_at.png

X axis is samples (xls file), and Y axis is log-expression.
Link to other DBs
Entrez Gene ID 816922      
Refseq ID (protein) NP_179968.2 


The preparation time of this page was 0.2 [sec].